Pinned Repositories
cfRNA-seq-pipeline-Ngo-manuscript-2019
This pipeline contains the data processing steps used for Thuy Ngo's 2019 cell-free RNA manuscript
BetaVAEMultImpute
ChIP-seq-pipeline
This is a pipeline to run basic Chromatin immunoprecipitation sequencing analysis for single-end or paired-end data.
Co-culture-Bulk-RNA-seq-pipeline
This is a pipeline to run basic RNA-seq analysis for single-end data.
ld-clump
negative-control-genomicc
pipeline-TCGA_GTEx-cfRNA
targene-pipeline
Nextflow pipeline for Targeted-Learning of genetic effects
TargeneCore.jl
Core Functionalities for TL-GWAS
gimmemotifs
Suite of motif tools, including a motif prediction pipeline for ChIP-seq experiments. See full GimmeMotifs documentation for detailed installation instructions and usage examples.
roskamsh's Repositories
roskamsh/BetaVAEMultImpute
roskamsh/pipeline-TCGA_GTEx-cfRNA
roskamsh/ChIP-seq-pipeline
This is a pipeline to run basic Chromatin immunoprecipitation sequencing analysis for single-end or paired-end data.
roskamsh/Co-culture-Bulk-RNA-seq-pipeline
This is a pipeline to run basic RNA-seq analysis for single-end data.
roskamsh/ld-clump
roskamsh/negative-control-genomicc