royerlab/cytoself

Code about Nucleus Segmentation

Yuangaga opened this issue · 2 comments

Yuangaga commented

Hi, very nice job!

Could I reference the code about nucleus segmentation mentioned in your NM article? I can't find it in this repository.

Thanks.

li-li-github commented

Hi, I'm sorry for the late reply.
The code mentioned in the article is this but I would recommend using StarDist.
Its pre-trained model 2D_versatile_fluo works better and is more flexible to various image data than our hardcoded algorithm.

  • 👍1
Yuangaga commented

Thank you very much for your help. I'll try it. ^_^