Pinned Repositories
ACTINN
Amann_dura_sc_10x
Repository for the single-cell RNA-Seq analysis of Dura mater immune cells
anne-data
Analysis for collaborators
friedrich-et-al-IDH1wt-mut-micr
genstats
Statistics course for JHU Genomic Data Science Sequence
geth-node
Deploy FixedSupplyToken to Private Network with Web3.js or Web3.py, Geth and Mist
LearnAnalytics-AnalyzingBigDataWithMRS
A tutorial on how to use Microsoft R's RevoScaleR package to process and build models with large datasets.
sankowski-et-al-microglia
sankowski-et-al-pnas-2019
RNA-Seq differential gene expression anlysis
sankowski_et_al_murine_CAMs
This is the code book for the Sankowski et al. manuscript on miren CNS-associated macrophages.
rsankowski's Repositories
rsankowski/sankowski-et-al-microglia
rsankowski/Amann_dura_sc_10x
Repository for the single-cell RNA-Seq analysis of Dura mater immune cells
rsankowski/antunes_gbm_cellphonedb
analysis of antunes data
rsankowski/brain-immune-resource
Published by Marco Prinz and other members of the Institute of Neuropathology at the University Clinic of Freiburg, this resource offers single-cell RNA-Sequencing datasets on brain immune cells from humans and mice under normal and pathological conditions. Its main goal is to ensure accessibility and usability, in line with the FAIR principles.
rsankowski/brain-immune-resource-v3
rsankowski/car_cell_collaboration
Analysis of different CAR cell constructs
rsankowski/comparative_analyses_masuda_et_al
Cross-dataset analyses of published MS datasets
rsankowski/eye_dataset_plot
recreation of the figure EV1 wieghofer et al dataset
rsankowski/frd_et_al_ml
rsankowski/gl261_meta_analysis
Meta analysis of published GL261 myeloid datasets
rsankowski/idat_data_checksum
rsankowski/immune-cell-resource-v2
Reworked resource of brain myeloid cells in normal and pathological conditions in humans and mice
rsankowski/immune-cell-resource-v3
rsankowski/jakel-et-al-raceid
RaceID analysis of the Jäckel et al. single-nuclei RNA-seq dataset ( https://www.nature.com/articles/s41586-019-0903-2 )
rsankowski/kidney_reperfusion_injury
Analysis of single-cell dataset of control and reperfusion injury kidney cells
rsankowski/Kindney_dataset_cell_type_assignment
Celltype assignment of Kidney dataset
rsankowski/locatelli_ms_celltype_comparison
Visualization of individual genes in the Jakel et al MS dataset
rsankowski/Methylome_patient_analysis
different workflows to visualize methylation data
rsankowski/microglia_dataset_integration
Integrated analysis of the Prinz lab microglia datasets
rsankowski/recountmethylation_server
Server code for Recount-Methylation database.
rsankowski/s3s_A_loesslein_analysis
Bulk RNA-Seq analyses of BCG mice
rsankowski/s3s_BV2_MGN
Analyses of bulk RNA-Seq data
rsankowski/sankowski-et-al-human-cams
Code for the Sankowski et al. manuscript on human CNS-associated macrophages
rsankowski/sankowski_et_al_human_CAMs
Codebook for the analysis of human CAMs
rsankowski/sankowski_et_al_human_CAMs_code
The code accompanying Sankowski et al 2023 paper on human CAMs
rsankowski/Seq_scope_flowcel_visualization
Setup analyses for SeqScope
rsankowski/ST_analysis_heiland_paper
Reanalysis of the of the ST GB data
rsankowski/STtools
rsankowski/Taka_A1_A2_only
Comparison A1 and A2 prgenitor cells
rsankowski/xenograft_nucseq
Single nucleus analysis of xenograft samples