Pinned Repositories
EvoFreq
Evolutionary frequency visualization tool of temporal data
NeoPredPipe
Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.
bios259-w24
Course material for BIOS259: The Art of Reproducible Science - A Hands-on Approach
Capsid_IDP_Classifier
Machine Learning Classifier for CRESS-DNA viral capsids
cloneid
CommandLineHAL
Options to create a HAL command line interface
COVID_Hospital
Modeling COVID Spread in the Hospital
Gattaca
Base Pair Resolution Mutation Tracking
IDP_Scripts
Scripts used for Intrinsically Disordered Protein Analysis
VariantFilter
Variant filter for various outputs. These include Octopus, MuTect2, Strelka2, and DRAGEN.
rschenck's Repositories
rschenck/COVID_Hospital
Modeling COVID Spread in the Hospital
rschenck/Gattaca
Base Pair Resolution Mutation Tracking
rschenck/IDP_Scripts
Scripts used for Intrinsically Disordered Protein Analysis
rschenck/VariantFilter
Variant filter for various outputs. These include Octopus, MuTect2, Strelka2, and DRAGEN.
rschenck/bios259-w24
Course material for BIOS259: The Art of Reproducible Science - A Hands-on Approach
rschenck/Capsid_IDP_Classifier
Machine Learning Classifier for CRESS-DNA viral capsids
rschenck/cloneid
rschenck/CommandLineHAL
Options to create a HAL command line interface
rschenck/DPhilRotation1
Code base for Rotation 1 of Genomic Medicine and Statistics D.Phil
rschenck/DPhilRotation1Part2
Genetic Analysis of PCAWG dataset. No data stored here at all!!!
rschenck/Epidermis_Project_Final
Epidermis_Project with the final framework
rschenck/fap
rschenck/game_of_life
Side Project fun with Conway's Game of Life
rschenck/mosaicDesert
Desert artwork for the Mathematical Oncology newsletter
rschenck/NeoPredPipe-1
Neoantigen Prediction Pipeline using ANNOVAR and netMHCpan
rschenck/ROI_DataExtraction_GMSOxford17
Script to pull data from fluorescence microscopy information from ROIs for Cell Imaging Module
rschenck/rschenck.github.io
Website
rschenck/TeamOrangeClone
Team Orange Clonal Dynamics Model