/PathogenTrackExplorer

R toolkit for exploring intracellular pathogens at Single-Cell level

Primary LanguageRMIT LicenseMIT

PathogenTrackExplorer

Exploring Intracellular Pathogens at Single-Cell level using PathogenTrackExplorer.

Installation

PathogenTrackExplorer R package can be easily installed under the following instruction:

BiocManager::install("topGO")
BiocManager::install("org.Hs.eg.db")
devtools::install_github("immunogenomics/harmony")
devtools::install_github("rstatistics/PathogenTrackExplorer")

Vignettes

Please check the following link to get a rapid understanding about PathogenTrackExplorer:

Walkthrough - Exploring Intracellular Pathogens of NSCLC at Single-Cell level using PathogenTrackExplorer

Help

If you have any problems, comments or suggestions, please contact rstatistics@sjtu.edu.cn and y12260@rjh.com.cn.

How to cite

Manual script in submission.