ruanjue/wtdbg2

Circularization?

Boston1212 opened this issue · 4 comments

Boston1212 commented

Hi,

I want to know if wtdabg2 can determine whether the strain is circularized.Thanks！！

ruanjue commented

wtdbg2 doesn't check that, but you can view the assembly from <prefix>.ctg.dot (graphviz format).

Boston1212 commented

Thanks for your reply!!!
But how to read this file,Is there any description about this file?Any advice would be helpful to me !

ruanjue commented

Please have a look at http://graphviz.org/, you can convert it into a pdf file using dot -Tpdf -O <prefix>.ctg.dot.

Boston1212 commented

I get it,Thanks !!!