ruanjue

To code, or not to code, that is the question

Agricultral Genomics InsitituteShenZhen, China

Pinned Repositories

bsalign
Banded Striped DNA Sequence Alignment
Language:C45 4 33
GAEP
A genome assembly assessment pipeline. (Developed By ZHANG Yong from CAAS)
Language:Perl0 0 01
KSNP-k-mer-based-haplotype-assembly
Language:C++0 0 01
kuafu
Alignment and assembly of pair-end short reads (Unfinished)
Language:C3 2 00
pgzf
Parallel blocked gzip file IO
Language:C6 2 10
psort
parallelly sort columns
Language:C4 2 10
smartdenovo
Ultra-fast de novo assembler using long noisy reads
Language:C129 15 5829
SRY
SRY: an effective method for sorting long-read of sex-limited (Y or W) chromosome. (Developed by WANG Xiaobo from CAAS)
Language:Shell3 0 00
wtdbg
A fuzzy Bruijn graph approach to long noisy reads assembly
Language:C39 7 713
wtdbg2
Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly
Language:C504 30 25392

ruanjue's Repositories

ruanjue/wtdbg2
Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly
Language:C504 30 25392
ruanjue/smartdenovo
Ultra-fast de novo assembler using long noisy reads
Language:C129 15 5829
ruanjue/bsalign
Banded Striped DNA Sequence Alignment
Language:C45 4 33
ruanjue/wtdbg
A fuzzy Bruijn graph approach to long noisy reads assembly
Language:C39 7 713
ruanjue/pgzf
Parallel blocked gzip file IO
Language:C6 2 10
ruanjue/psort
parallelly sort columns
Language:C4 2 10
ruanjue/kuafu
Alignment and assembly of pair-end short reads (Unfinished)
Language:C3 2 00
ruanjue/SRY
SRY: an effective method for sorting long-read of sex-limited (Y or W) chromosome. (Developed by WANG Xiaobo from CAAS)
Language:Shell3 0 00
ruanjue/filterx
A tool that manipulate tab-delimited files
Language:C2 2 0
ruanjue/wtdbg-2.huge
Language:C1
ruanjue/GAEP
A genome assembly assessment pipeline. (Developed By ZHANG Yong from CAAS)
Language:Perl0 0 01
ruanjue/KSNP-k-mer-based-haplotype-assembly
Language:C++0 0 01