Pinned Repositories
aidrugud.github.io
TPD
TPD: A Computational Pipeline for Therapeutic Phage Discovery from Prophages
viroprofiler
A containerized bioinformatics pipeline for viral metagenomic data analysis
bioinformatics-algorithms-coursera
Solutions to Programming Assignments for Bioinformatics Algorithms (Part 1) on Coursera.org
cmder_mini
courses
Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1
datasharing
The Leek group guide to data sharing
DeepsmirUD_web
Shiny APP for DeepsmirUD
pred_ppi
zotero2notion
Import zotero library to notion database
rujinlong's Repositories
rujinlong/zotero2notion
Import zotero library to notion database
rujinlong/DeepsmirUD_web
Shiny APP for DeepsmirUD
rujinlong/rujinlong
rujinlong/TPD
TPD: A Computational Pipeline for Therapeutic Phage Discovery from Prophages
rujinlong/CAMISIM
CAMISIM: Simulating metagenomes and microbial communities
rujinlong/cellenium
Cellenium is a FAIR and scalable interactive visual analytics app for scRNA-Seq data (single-cell RNA sequencing).
rujinlong/ColabDock
Code for ColabDock paper
rujinlong/deepdlncud
DeepdlncUD is used to predict the regulation types of small molecules on modulating lncRNA expression, which is powered by 9 deep learning models.
rujinlong/Dense-Homolog-Retrieval
Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval
rujinlong/DRAM
Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes
rujinlong/gvhdvirome
rujinlong/KEMET
KEGG Module Evaluation Tool
rujinlong/metarnaseq
rujinlong/my-tv
我的电视 电视直播软件，安装即可使用
rujinlong/obsidian-copilot
A ChatGPT Copilot in Obsidian
rujinlong/obsidian-gemini-assistant
Your AI assistant in obsidian
rujinlong/p0062-vHyDeg
vHyDeg: virus-encoded Hydrocarbon Degradation genes
rujinlong/PhaGCN2
rujinlong/phold
Phage Annotation using Protein Structures
rujinlong/projthis
Lightweight Framework for Analysis Development
rujinlong/pyCirclize
Circular visualization in Python (Circos Plot, Chord Diagram)
rujinlong/rujinlong.github.io
My personal webpage
rujinlong/SGVFinder
rujinlong/svlearn
A machine learning-based genotyping tool for structural variation in short reads
rujinlong/TAPIS
rujinlong/testgit
rujinlong/viral-protein-function-plm
Viral protein family functional prediction using protein language models
rujinlong/virnestsim
rujinlong/vpfkit
vpfkit: ViroProfiler Toolkit
rujinlong/zotero-pdf-translate
Translate PDF, EPub, webpage, metadata, annotations, notes to the target language. Support 20+ translate services.