Pinned Repositories
inteSIN
integrated sample-specific inference networks
metaindex
integrated microbial index
Metasimu
A R package for simulate the metagenomic profile data
MetaVis
high quality and reproducible visualization
microbiotaPair
An R Package for Simplified Microbiome Analysis Workflows on Intervention Study
MLIM-course-from-KU
Machine Learning and Imaging Methods
ReportScore
This package maybe useful for function enrichment analysis based ko profile
rmeta
collect the R function for daily work
RNA-seq-2019nCov
RNA-seq pipeline
rusher321.github.io
rusher321's Repositories
rusher321/microbiotaPair
An R Package for Simplified Microbiome Analysis Workflows on Intervention Study
rusher321/rmeta
collect the R function for daily work
rusher321/inteSIN
integrated sample-specific inference networks
rusher321/ReportScore
This package maybe useful for function enrichment analysis based ko profile
rusher321/RNA-seq-2019nCov
RNA-seq pipeline
rusher321/MetaVis
high quality and reproducible visualization
rusher321/rusher321.github.io
rusher321/SWEET_plus
Sample-specific weighted correlation network
rusher321/deepPhage
rusher321/DeepTools-Microbiome
A list of deeplearning tools for metagenome data analysis
rusher321/metaindex
integrated microbial index
rusher321/Metasimu
A R package for simulate the metagenomic profile data
rusher321/AiLearning
AiLearning: 机器学习 - MachineLearning - ML、深度学习 - DeepLearning - DL、自然语言处理 NLP
rusher321/blogR
A blog to intergrate information and knowledge
rusher321/chinese-independent-blogs
中文独立博客列表
rusher321/Groningen-Microbiome
Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groningen
rusher321/inStrain
Bioinformatics program inStrain
rusher321/iodraw-files
流程图, 思维导图, 甘特图, 在线白板, 代码绘图, 在线图表
rusher321/learning_python
learn python quickly
rusher321/mindr
an R package which converts markdown files (.md, .Rmd) into mindmaps (brainstorms)
rusher321/MNLCor
Metabiome Nonlinear correlation
rusher321/OAD_Microbiota
rusher321/Python_tools
collect python litter functions
rusher321/quantpi
Microbiome profiling
rusher321/Rtemplate
A R package template
rusher321/spateo-release
Spatiotemporal modeling of spatial transcriptomics
rusher321/StrainPanDA
A method for reconstruction of subspecies composition and functional profiles from metagenomic data
rusher321/taxa
taxonomic classes for R
rusher321/UCAN_Microbiome
We implemented a rigorous pipeline to detect, decontaminate, and quantify tissue-resident microbiota in CRC patients from the U-CAN study.
rusher321/useful-tools
A list of useful tools and programs for developers, DevOps and SysAdmins