/uniprot2fasta

Converts a UniProt XML formatted file into a FASTA file.

Primary LanguageClojureEclipse Public License 1.0EPL-1.0

uniprot2fasta

Converts a UniProt XML formatted file into a FASTA file.

Installation

Use the BASH script in the bin directory or recompile to a jar using lein uberjar.

Usage

$ java -jar uniprot2fasta-0.1.0-standalone.jar [args]

or

$ uniprot2fasta.sh [args]

Options

-i, --in PATH Path to UniProt xml formatted file to be converted. -h, --help Print help message.

License

Copyright © 2016 Jason Mulvenna

Distributed under the Eclipse Public License either version 1.0 or (at your option) any later version.