Repository of data and code for the manuscript "The bacterial microbiome of symbiotic and menthol-bleached polyps of Galaxea fascicularis in captivity".
Analysis of 🦠bacterial (16S) and 🟢Symbiodiniaecae (ITS2) community composition using Next Generation Sequencing (MiSeq Illumina).
Data analyzed in:
- Qiime2: (bacteria) raw sequencing data to feature table with assigned taxonomy, see code here
- SymPortal: (Symbiodiniacaea) raw sequencing data to ITS2 sequence types
- R: statistical testing and data visualization (system info, and R and R packages version listed here)
Deposited on bioRxiv > submitted to Peer Community In > Peer Community Journal Microbiol: 💎🔓📖 Diamond Open Access Journal!
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