Pinned Repositories
delaunay_watershed_2d
Delaunay-Watershed builds sparse geometrical representations of tissues and cell nuclei from instance segmentations in 2D
delaunay_watershed_3d
Delaunay-Watershed builds multimaterial triangle meshes of tissues and cell nuclei from instance segmentations in 3D
deltamic
Differentiable Rendering for 3D Fluorescence Microscopy
Design-starter-pack
Simple resources to get started with design
docs
foambryo
Python package to infer tensions and pressures from 3D microscopy images of embryos and tissues
foambryo2D
Tension inference from cell-segmentation in two dimensional tissues
optiflow
Reconstruction of flows from kymographs with optimal transport
outlines-mlx
A fast minimalistic implementation of guided generation on Apple Silicon using Outlines and MLX
tiny-surface-evolver
A minimal implementation of Surface Energy minimization using PyTorch
sacha-ichbiah's Repositories
sacha-ichbiah/outlines-mlx
A fast minimalistic implementation of guided generation on Apple Silicon using Outlines and MLX
sacha-ichbiah/tiny-surface-evolver
A minimal implementation of Surface Energy minimization using PyTorch
sacha-ichbiah/optiflow
Reconstruction of flows from kymographs with optimal transport
sacha-ichbiah/delaunay_watershed_2d
Delaunay-Watershed builds sparse geometrical representations of tissues and cell nuclei from instance segmentations in 2D
sacha-ichbiah/Design-starter-pack
Simple resources to get started with design
sacha-ichbiah/delaunay_watershed_3d
Delaunay-Watershed builds multimaterial triangle meshes of tissues and cell nuclei from instance segmentations in 3D
sacha-ichbiah/deltamic
Differentiable Rendering for 3D Fluorescence Microscopy
sacha-ichbiah/docs
sacha-ichbiah/foambryo
Python package to infer tensions and pressures from 3D microscopy images of embryos and tissues
sacha-ichbiah/foambryo2D
Tension inference from cell-segmentation in two dimensional tissues
sacha-ichbiah/M2ICFP
Webpage for the M2 ICFP course 'Physics of multicellular systems'
sacha-ichbiah/meshFT
A minimalist library to provide Fourier transforms on triangle meshes
sacha-ichbiah/outlines
Guided Text Generation