saketkc

IIT BombayMumbai

Pinned Repositories

blog
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covmuller
Covmuller is an R-package designed for analysis of SARS-CoV-2 sequencing metadata deposited on GISAID
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fos-proposals
:gift_heart: :penguin: Archive of GSoC proposals
Language:Python528 13 2176
gencode_regions
Extract 3'UTR, 5'UTR, CDS, Promoter, Genes, Introns, Exons from GTF files
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hatex
'h'omeworks, 'a'ssignments 'tex' for courses at USC
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pySCTransform
Python package to perform normalization and variance-stabilization of single-cell data
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pyseqlogo
Python package to plot sequence logos
Language:Python29 2 619
pysradb
Package for fetching metadata and downloading data from SRA/ENA/GEO
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rna-seq-snakemake
Snakemake based pipeline for RNA-Seq analysis
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ribotricer
A tool for accurately detecting actively translating ORFs from Ribo-seq data
Language:Python39 4 609

saketkc's Repositories

saketkc/motif-logos-matplotlib
Motif logos in matplotlib (POC)
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saketkc/multiZ-scripts
Snakefiles/Python scripts to create conservation tracks
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saketkc/variational-autoencoders-tf-eager
Variational autoencoders using Tensorflow's eager API
Language:Jupyter Notebook4 2 01
saketkc/biojs-genetic-variation-viewer
:recycle: BioJS1.0 Component for visualising human gentic variations, GSoC2014
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saketkc/iclip-seq-snakemake
Snakemake based pipeline for analysing iCLIP-Seq data
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saketkc/review
Review of Scientific Papers
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saketkc/ribo-seq-snakemake
Snakemake pipeline for Ribo-Seq analysis
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saketkc/rnn-cds-prediction
Prediction of CDS regions using RNNs
2 2 0
saketkc/dotfiles
Collection of dotfiles
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saketkc/math-screening-solutions
:green_book: :mortar_board: Solutions for MATH Screening Exams
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saketkc/overleaf-cloner
Clone your Overleaf.com projects at once!
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saketkc/pyjoyplot
POC for a 'joyplot' using matplotlib
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saketkc/riddler
538 -- We all need stimulants.
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saketkc/rss-graduate-diploma-solutions
Solutions to Royal Statistical Society's Graduate Diploma in Statistics Examination
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saketkc/talks
Monologues. mostly.
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saketkc/dynamic-time-warping
DTW in Python
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saketkc/GCCA
Generalized Canonical Correlation Analysis
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saketkc/moca-scripts
Scripts for moca
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saketkc/moralistic-motifs
Review of motif finders with a focus on phylogenetic footprinting
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saketkc/pyeasyga
A simple and easy-to-use implementation of a Genetic Algorithm library in Python
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saketkc/pywt
PyWavelets - Wavelet Transforms in Python
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saketkc/qstat-hpc-cmb-usc
Track running jobs on USC's hpc
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saketkc/saketkc.github.io.archived
Soure code for http://saket-choudhary.me
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saketkc/scilab-on-cloud
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saketkc/scilab_cloud_interface
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saketkc/ugc-predatory-journal-analysis
UGC's preferred list is predatory
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saketkc/usc-math-505A-screening-solutions
Solutions to USC's MATH-505A Screening Exams
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saketkc/usc-math-541A-screening-solutions
Solutions to USC's MATH-541A Screening Exams
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saketkc/usc-math-541B-screening-solutions
Solutions to USC's MATH-541b Screening Exams
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saketkc/wavelets-mixed-models
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