Pinned Repositories
bam.iobio-docker
Container for https://github.com/chmille4/bam.iobio.io
bimodalFitter
Find a two component gaussian mixture that fits the given data
bio_tools
my libraries for comp bio
compmut
Compensatory Mutations
conda-singularity-docker
Put anaconda and singularity into a container
cv
latex cv
genecards
Free API for genecards.org
hgnc
HGNC REST API functions for python
pathopredictor
Predict pathogenic and benign missense variant status
vcfanno_lua
Lua annotation scripts for vcfanno
samesense's Repositories
samesense/bfx-docker
Bioinformatics dockerfiles
samesense/blog
hugo blog
samesense/bq-genomics-tools
samesense/conda-activator-py
samesense/containers
Bioinformatics containers
samesense/cromwell-monitor
Generate stats for Cromwell task calls including resource utilization & estimated costs
samesense/cx30
samesense/deep-learning-with-python-notebooks
Jupyter notebooks for the code samples of the book "Deep Learning with Python"
samesense/gatk4-genome-processing-pipeline
Workflows used for processing whole genome sequence data + germline variant calling.
samesense/gatk4-germline-snps-indels
Workflows for germline short variant discovery with GATK4
samesense/genbq
samesense/home-manager-configuration
Ryan's crazy Home Manager setup! :-D
samesense/Iterative_masking
Iterative masking algorithm on MSA Transformer to generate synthetic sequences
samesense/kickstart.nvim
A launch point for your personal nvim configuration
samesense/linkinbio
linkinbio ig landing page
samesense/links
Weekly week dumps
samesense/m6a
Reproduction/refactor of Dominissini et al Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq
samesense/minimal
A minimal Python package.
samesense/nvim-sm-helpers
Test nvim plugin for snakemake helper functions
samesense/python-bmpr
samesense/python-bumper
samesense/python-cath
Concatenate files w/ headers
samesense/samesense
Hugo web site
samesense/sircel
Identify cell barcodes from single-cell genomics sequencing experiments
samesense/sm-template
Snakemake project template
samesense/swarm-gpt-data
Process foursquare data
samesense/trash.nvim
Trying to make an nvim plugin
samesense/working
samesense/yt-eda
Explore content of saved youtube vids
samesense/zyrtec-log