sammyjava
I'm a physicist, web developer, and computational biologist that codes mostly in Java.
National Center for Genome ResourcesUnited States
Pinned Repositories
apollo-elements-in-react
apollo elements experiments in React
ASPB2017
Poster for the 2017 ASPB PlantBio conference
bsharp-pubag
Code to mine data from USDA PubAg
bsharp-pubmed
Java package for fetching content from PubMed
covid-R
R routines for reading and plotting COVID-19 related data
Cowpea
Various analyses related to cowpea
DNAnexus
DNAnexus platform applets
neptune
IMS Neptune Java-based Web content management system
pangenomics
Java code writtten for pangenomics work
SoyBase
Scripts to suck data out of the SoyBase MySQL database for loading into the mines (and upload to the LIS datastore)
sammyjava's Repositories
sammyjava/neptune
IMS Neptune Java-based Web content management system
sammyjava/pangenomics
Java code writtten for pangenomics work
sammyjava/SoyBase
Scripts to suck data out of the SoyBase MySQL database for loading into the mines (and upload to the LIS datastore)
sammyjava/apollo-elements-in-react
apollo elements experiments in React
sammyjava/bsharp-pubag
Code to mine data from USDA PubAg
sammyjava/bsharp-pubmed
Java package for fetching content from PubMed
sammyjava/covid-R
R routines for reading and plotting COVID-19 related data
sammyjava/Cowpea
Various analyses related to cowpea
sammyjava/DNAnexus
DNAnexus platform applets
sammyjava/GCNG
using graph convolutional neural network and spaital transcriptomics data to infer cell-cell interactions
sammyjava/gsoc
InterMine GSoC informational mini-site for gsoc mentors and students
sammyjava/imjs-sorting-test
Test imjs sorting
sammyjava/jaxrs-analyzer-gradle-plugin
Gradle plugin for the https://github.com/sdaschner/jaxrs-analyzer [JAX-RS Analyzer].
sammyjava/Maize2018-MGP
MGP poster for the 2018 Maize meeting in France
sammyjava/Newick-validator
Newick format validator, project for the Bioinformatic course, UniversitĂ di Milano Bicocca
sammyjava/openai-cookbook
Examples and guides for using the OpenAI API
sammyjava/openai-java
OpenAI GPT-3 Api Client in Java
sammyjava/openai-quickstart-node
Node.js example app from the OpenAI API quickstart tutorial
sammyjava/PDcut
Routines for the PDcut project
sammyjava/PRS-Tutorial
A tutorial on how to run basic polygenic risk score analysis
sammyjava/react-canvasxpress
React canvasXpress demo
sammyjava/react-func-openlayers
A sample application that demonstrates how to integrate OpenLayers with React Functional Components.
sammyjava/react-gene-search
sammyjava/react-leaflet-kml
React leaflet wrapper of leaflet-kml
sammyjava/react-openai-app
React OpenAi Starter Project
sammyjava/react-translator
An example React app that uses a HF model for language translation
sammyjava/snotel
CSV dumps and R routines for loading and overplotting snow depth
sammyjava/weka
Handy routines for using the Weka machine learning suite
sammyjava/weka-dev
Experiments with the Weka Java API for machine learning
sammyjava/xgboost
Routines that implement ml.dmlc/xgboost4j