Release Prep v2.2.0
Closed this issue · 3 comments
samuel-marsh commented
To Do:
- anndata warnings (#162)
- LIGER 2.0 compatibility or warning messages (#161)
- Spatial Plots (if time) (#160)
-
ggprism workaround if not fixed before CRAN removal (csdaw/ggprism#25) - Metrics Single Directory
- Factor_Cor_Plot
- Add_Hemo
- Update Vignettes
- Update pkgdown site
samuel-marsh commented
- [ ] Add Spatial Assay to as.anndata?
Not now. Have to figure out some image conversion metrics and not priority for time being.
samuel-marsh commented
Final LIGER related changes:
- Idents()
- Rename_Clusters()
- Factor Cor Plot Clustering
samuel-marsh commented
Vignette Changes Needed:
- seq_zeros
- Chicken as species
- Spatial Plots
- cutoff line width
- Add mito ribo dual
- scripts for qc lists
LIGER Vignettes:
- Subset liger
- liger cells by identities
- LIGER/Seurat Shared Generics
- Rename Clusters for LIGER
- Factor Cor Plots