sandrav-CGEN

Pinned Repositories

• infercnvpy

  Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy.

  Language:Python13345327

• scanpy

  Single-cell analysis in Python. Scales to >1M cells.

  Language:Python1.9k511.7k594

• mousipy

  Translates an AnnData object with mouse gene symbols into one with human gene symbols by mapping orthologs from biomart.

  Language:Jupyter Notebook17344

• scvelo

  RNA Velocity generalized through dynamical modeling

  Language:Python41213791102

sandrav-CGEN's Repositories