Pinned Repositories
CREoLE
Consensus Representation Estimation of Lineage Expression for Single-Cell RNA-seq Analysis
DeepPATH
Classification of Lung cancer slide images using deep-learning
HEnorm_python
H&E histopathological staining normalization
ImageVAE
Variational autoencoder (VAE) for image analysis, built in keras
massSpecShinyViewer
Shiny interface to visualize mass spec data
NEMO
Neural Estimation of Metastatic Origin (NEMO)
OHSU_dissertation_template
Easy-to-use pre-configured template for an OHSU dissertation
tensorflow-gpu-exacloud
A quick tutorial for getting up and running with TensorFlow on Exacloud GPUs
VAEcallback
Keras callback class to visualize training of a variational autoencoder
XAE
Cycle consistent cross-domain autoencoder
schaugf's Repositories
schaugf/HEnorm_python
H&E histopathological staining normalization
schaugf/ImageVAE
Variational autoencoder (VAE) for image analysis, built in keras
schaugf/OHSU_dissertation_template
Easy-to-use pre-configured template for an OHSU dissertation
schaugf/CREoLE
Consensus Representation Estimation of Lineage Expression for Single-Cell RNA-seq Analysis
schaugf/NEMO
Neural Estimation of Metastatic Origin (NEMO)
schaugf/tensorflow-gpu-exacloud
A quick tutorial for getting up and running with TensorFlow on Exacloud GPUs
schaugf/massSpecShinyViewer
Shiny interface to visualize mass spec data
schaugf/VAEcallback
Keras callback class to visualize training of a variational autoencoder
schaugf/XAE
Cycle consistent cross-domain autoencoder
schaugf/DeepPATH
Classification of Lung cancer slide images using deep-learning
schaugf/detectron2
Detectron2 is FAIR's next-generation platform for object detection and segmentation.
schaugf/DiffMap
Diffusion mapping dimensional reduction algorithm
schaugf/dl-with-bayes
Contains code for the NeurIPS 2019 paper "Practical Deep Learning with Bayesian Principles"
schaugf/ImageGrid
Generate grid of images given positional coordates
schaugf/ManifoldWalk
Walk latent feature manifolds of traned variational autoencoding models
schaugf/MUNIT-Tensorflow
Simple Tensorflow implementation of "Multimodal Unsupervised Image-to-Image Translation" (ECCV 2018)
schaugf/omero_downloader
Batch download image files from an OMERO server
schaugf/PhysiCell
PhysiCell: Scientist end users should use latest release! Bugfixes should be submitted to the development branch.
schaugf/pytorch-vae
A CNN Variational Autoencoder (CNN-VAE) implemented in PyTorch
schaugf/SimCLR
PyTorch implementation of SimCLR: A Simple Framework for Contrastive Learning of Visual Representations
schaugf/tSNEsweep
Sweep through the tSNE perplexity parameter to visualize sensitivity using Slurm
schaugf/UNIT
Unsupervised Image-to-Image Translation