Deal with .obsm and .varm when converting to SingleCellExperiment object
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LouiseDck commented
At least have a way to store the basic dimensionality reductions in reducedDims.
Would be best to have the configuration of what to store where somewhat similar to the Seurat conversion. (See #60)
lazappi commented
This is the conversion we use in {zellkonverter}
https://github.com/theislab/zellkonverter/blob/devel/man/figures/AnnData2SCE.png?raw=true