Issues
- 3
Implement zarr backend
#91 opened by LouiseDck - 0
Feature Request: Increase flexibility of `to_Seurat`
#165 opened by JohnMMa - 0
Error accessing `X` in `HDF5AnnData` when empty
#164 opened by lazappi - 2
Move dummy data functions back to main package
#136 opened by lazappi - 0
Write HDF5 categoricals correctly using attributes
#154 opened by lazappi - 1
Handle compressed H5AD files
#75 opened by lazappi - 2
Reading in h5ad file from anndata < 0.8.0
#134 opened by dchlee - 2
Automatically setup conda env
#97 opened by bschilder - 1
- 0
Compatibility with Seurat v5
#133 opened by lazappi - 3
Implement `from_Seurat` and `to_Seurat`
#60 opened by rcannood - 0
`{obsm,varm,obsp,varp}_keys` like `layers_keys`
#129 opened by ivirshup - 2
Handle reading empty H5AD slots
#86 opened by lazappi - 0
Previously written fields are not cleaned up
#121 opened by ivirshup - 0
Read H5AD uns
#24 opened by lazappi - 1
- 3
Add `example_anndata` constructor
#103 opened by bschilder - 0
- 0
Add `AnnData()` helper function
#92 opened by rcannood - 1
Check whether the compression works
#93 opened by rcannood - 1
Add vignette
#95 opened by LouiseDck - 5
- 0
Support updated rhdf5 handling of nullable vectors and boolean enums (e.g., ordered factors)
#82 opened by mtmorgan - 1
Read/write H5AD obs/var names directly
#87 opened by lazappi - 2
Share validation functions?
#52 opened by lazappi - 6
Automated feature tracker
#53 opened by rcannood - 9
Different docs url
#66 opened by ivirshup - 8
Interface for writing to disk
#51 opened by lazappi - 2
Admin rights to the repo
#39 opened by rcannood - 5
Decide on how to name conversion functions
#44 opened by rcannood - 0
Read H5AD obs names
#25 opened by lazappi - 0
Read H5AD var names
#26 opened by lazappi - 0
- 1
Read H5AD varm
#21 opened by lazappi - 1
Read H5AD obsp
#22 opened by lazappi - 1
Read H5AD varp
#23 opened by lazappi - 1
Read H5AD obsm
#20 opened by lazappi - 0
Read H5AD n_obs
#17 opened by lazappi - 0
Read H5AD n_var
#18 opened by lazappi - 1
Read H5AD layers
#19 opened by lazappi - 0
Read H5AD var
#15 opened by lazappi - 0
Read H5AD X
#16 opened by lazappi - 1
Delayed array support?
#128 opened by ivirshup - 3
- 1
Add rworkflows
#94 opened by bschilder - 4
- 0
Implement `from_SingleCellExperiment`
#59 opened by rcannood - 3
Coordinating with `scKirby`
#71 opened by bschilder - 3
obs_names and var_names as character/str or not
#73 opened by rcannood - 1
Create pkgdown site
#61 opened by rcannood