Automatically setup conda env
Opened this issue · 2 comments
bschilder commented
Add a function that auto-installs miniconda
and then sets up a conda
env to .
This would only be run when:
- an
anndataR
function (or unit test) requires reticulate. - the conda env is not already present.
Could use either reticulate
or basilisk
for this.
bschilder commented
Created new function: setup_conda
https://github.com/bschilder/anndataR/blob/rworkflows/R/setup_conda.R
lazappi commented
This should use {basilisk} for Bioconductor compatibility. I'm not 100% sure we want to mess around with Python environments in this package though.