scverse/anndataR

Automatically setup conda env

Opened this issue · 2 comments

Add a function that auto-installs miniconda and then sets up a conda env to .
This would only be run when:

  1. an anndataR function (or unit test) requires reticulate.
  2. the conda env is not already present.

Could use either reticulate or basilisk for this.

This should use {basilisk} for Bioconductor compatibility. I'm not 100% sure we want to mess around with Python environments in this package though.