/ichorcna-nf

Primary LanguageNextflow

ichorCNA Nextflow pipeline

nf-core modules changes

I've modified the nf-core ichorcna/run module to:

  • allow tumour-only and tumour/normal inputs,
  • include a stub section, and
  • use functioning container images

Stub runs

Used to demostrate relation between processes

nextflow run main.nf -params-file params.json -stub