seppinho/mutserve

line break in raw.txt file

haansi opened this issue · 1 comments

in rc6 -> --write-raw emits wrong file - no newline after last entry per sample after position 16569:

S5.bam 16569 G G - G - 2617 2908 5525 0 0.0 0.0 0.0 1.0 0.0 0.0 0.0 0.0 0.0 1.0 0.0 0.0 0.0 1.0 1.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 []S20.bam 1 G G - G - 1088 1361 2449 0 0.0 0.0 0.0 1.0 0.0 0.0 0.0 0.0 0.0 1.0 0.0 0.0 0.0 1.0 1.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 []
S20.bam 2 A A G A - 1128 1364 2492 0 0.0 0.999113475177305 0.0 8.865248226950354E-4 0.0 0.0 0.0 1.0 0.0 0.0 0.0 0.0 0.0 0.999113475177305 1.0 8.865248226950354E-4 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 []

fixed, see 4a58582