Seqera

Powering the next generation of big data analysis applications

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Pinned Repositories

nextflow-tutorial
Nextflow training material for introductory tutorial
Language:Nextflow95 4 042
nf-tower
Nextflow Tower system
Language:Groovy142 17 30951
nf-training-advanced
Customer workshop materials
Language:Nextflow167
seqera-kit
Python implementation and field-tool for automated pipeline launching through Tower CLI (beta)
Language:Python226
showcase
Infrastructure as code implementation of the seqeralabs/showcase on Seqera
Language:Shell11 7 09
tower-agent
Agent app that allows connecting remote batch schedulers to Tower Cloud
Language:Java8 9 333
tower-cli
Nextflow Tower CLI tool
Language:Java39 15 2329
wave
On-demand containers provisioning service
Language:Groovy27 10 2313
wave-cli
Command line tool for Wave containers provisioning service
Language:Java12 13 363
wave-showcase
Examples showing how to configure Nextflow to run with Wave containers provisioning service
Language:Nextflow195

Seqera's Repositories

seqeralabs/tower-cli
Nextflow Tower CLI tool
Language:Java39 15 2329
seqeralabs/wave
On-demand containers provisioning service
Language:Groovy27 10 2313
seqeralabs/seqera-kit
Python implementation and field-tool for automated pipeline launching through Tower CLI (beta)
Language:Python226
seqeralabs/wave-showcase
Examples showing how to configure Nextflow to run with Wave containers provisioning service
Language:Nextflow195
seqeralabs/wave-cli
Command line tool for Wave containers provisioning service
Language:Java12 13 363
seqeralabs/showcase
Infrastructure as code implementation of the seqeralabs/showcase on Seqera
Language:Shell11 7 09
seqeralabs/nf-dragen
POC Nextflow pipeline to run Illumina DRAGEN software
Language:Nextflow86
seqeralabs/nf-aggregate
Pipeline to aggregate pertinent metrics across pipeline runs on the Seqera Platform (beta)
Language:HTML57
seqeralabs/nf-tower-aws
Repository containing required policies for Nextflow Tower deployment on AWS
5 17 45
seqeralabs/nf-canary
A minimal Nextflow workflow for testing infrastructure.
Language:Nextflow4 4 63
seqeralabs/logos
Seqera official logos
3
seqeralabs/nf-training-intro
Language:Nextflow3 6 06
seqeralabs/cx-field-tools-installer
Unofficial Terraform solution to help clients install Seqera Platform
Language:HCL2 9 271
seqeralabs/datasets-automation-blog
Repository for the Seqera Labs Workflow Automation for Nextflow Tower Pipelines blog post
Language:Python2
seqeralabs/platform-installer
Seqera Platform installer scripts
Language:Shell22
seqeralabs/xpack-google
Google extension package for Nextflow
2 3 0
seqeralabs/aws-s3-download
Bare minimal S3 download client for testing purpose
Language:Java1
seqeralabs/docs
Source code for the Seqera documentation portal.
Language:MDX1
seqeralabs/libseqera
Library for Java & Groovy modules shared across Seqera projects
Language:Groovy1 5 31
seqeralabs/setup-seqerakit
Github Action to set up seqerakit
10
seqeralabs/.github
Files for the @SeqeraLabs GitHub organisation.
2 01
seqeralabs/action-tower-launch
GitHub Action to launch a workflow using Seqera Platform
Language:Shell3 51
seqeralabs/event-handler-app-interview-pedro
A repository with a skeleton application for remote Interview
1
seqeralabs/ffq-api
A minimal wrapper to make ffq searches available via a REST API.
Language:Python18 4
seqeralabs/homebrew-tap
Homebrew Tap of Seqera products and tools
Language:Ruby1
seqeralabs/migtool
No-frills DB migration tool
Language:Groovy7 16
seqeralabs/nf-benchmark
Language:Nextflow0 0
seqeralabs/showcase-automation
Language:Python4 10
seqeralabs/wave-k8s-deployment
Reference deployment for Wave container provisioner
Language:Shell17 1
seqeralabs/xpack-amzn
AWS Xpack for Nextflow
1