Seqera

Powering the next generation of big data analysis applications

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Pinned Repositories

nextflow-tutorial
Nextflow training material for introductory tutorial
Language:Nextflow103 4 045
nf-tower
Nextflow Tower system
Language:Groovy147 18 30952
nf-training-advanced
Customer workshop materials
Language:Nextflow17 4 08
seqera-kit
Python implementation and field-tool for automated pipeline launching through Tower CLI (beta)
Language:Python25 3 677
showcase
Infrastructure as code implementation of the seqeralabs/showcase on Seqera
Language:Shell11 8 011
tower-agent
Agent app that allows connecting remote batch schedulers to Tower Cloud
Language:Java8 10 345
tower-cli
Nextflow Tower CLI tool
Language:Java43 17 2669
wave
On-demand containers provisioning service
Language:Groovy35 12 3214
wave-cli
Command line tool for Wave containers provisioning service
Language:Java13 14 403
wave-showcase
Examples showing how to configure Nextflow to run with Wave containers provisioning service
Language:Nextflow20 6 45

Seqera's Repositories

seqeralabs/nf-tower
Nextflow Tower system
Language:Groovy147 18 30952
seqeralabs/nf-k8s-best-practices
A best practices guide for Nextflow on Kubernetes
Language:Shell18 4 00
seqeralabs/nf-training-advanced
Customer workshop materials
Language:Nextflow17 4 08
seqeralabs/nf-dragen
POC Nextflow pipeline to run Illumina DRAGEN software
Language:Nextflow11 6 06
seqeralabs/nf-tower-aws
Repository containing required policies for Nextflow Tower deployment on AWS
7 17 48
seqeralabs/git-readme
An opinionated collection of Git one-liners
4 3 01
seqeralabs/conda-recipes
Conda recipes for the Eel project
Language:Shell3 5 41
seqeralabs/logos
Seqera official logos
3 14 0
seqeralabs/nf-training-intro
Language:Nextflow3 6 06
seqeralabs/platform-installer
Seqera Platform installer scripts
Language:Shell2 13 62
seqeralabs/slurm-simulator
Allow simulating Slurm command locally running it in Docker container
Language:Shell2 2 01
seqeralabs/xpack-google
Google extension package for Nextflow
2 3 0
seqeralabs/aws-s3-download
Bare minimal S3 download client for testing purpose
Language:Java1 13 1
seqeralabs/fusion-vs-mountpoint-benchmark
Benchmark suite to compare of Fusion, AWS Mountpoint and RClone
Language:Shell1 2 1
seqeralabs/nf-pipelines
Language:Nextflow1 4 0
seqeralabs/remark-yaml-to-table
A remark plugin that converts structured YAML to a GFM Markdown table
Language:JavaScript1 2 0
seqeralabs/setup-seqerakit
Github Action to set up seqerakit
1 2 00
seqeralabs/reports-test-nf
Language:HTML0 20 01
seqeralabs/.github
Files for the @SeqeraLabs GitHub organisation.
2 01
seqeralabs/app-bootstrap
Micronaut application bootstrap
Language:Groovy3 0
seqeralabs/containers
Bitnami container images
Language:Shell1 0
seqeralabs/docs-previewer
Language:JavaScript3 1
seqeralabs/ffq-api
A minimal wrapper to make ffq searches available via a REST API.
Language:Python20 4
seqeralabs/nf-benchmark
Language:Nextflow0 0
seqeralabs/nf-stresswave
Nextflow pipeline to stress Wave service
Language:Nextflow1
seqeralabs/spack
A flexible package manager that supports multiple versions, configurations, platforms, and compilers.
Language:Python1 1
seqeralabs/surrealdb.java
SurrealDB driver for Java
Language:Java1 0
seqeralabs/wave-modules
Placeholder repository to host Wave packages
2 0
seqeralabs/website-components
Language:JavaScript20 0
seqeralabs/xpack-amzn
AWS Xpack for Nextflow
4 01