Pinned Repositories
automateImod
cryoEM-Bash
scripts to monitor cryo-em jobs
cryoEM-Python
darkblur
A simple utility to detect dark or blurry micrographs processed using Warp
muriel
Simple subtomogram backmapper in Python
WarpToolsWrapper
A light wrapper around warp/M
shahpnmlab's Repositories
shahpnmlab/cryoEM-Bash
scripts to monitor cryo-em jobs
shahpnmlab/cryoEM-Python
shahpnmlab/WarpToolsWrapper
A light wrapper around warp/M
shahpnmlab/darkblur
A simple utility to detect dark or blurry micrographs processed using Warp
shahpnmlab/muriel
Simple subtomogram backmapper in Python
shahpnmlab/academicpages.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
shahpnmlab/automateImod
shahpnmlab/cryoEM-MATLAB
shahpnmlab/dynamo2m
a bidirectional interface between Dynamo and the Warp-RELION-M pipeline
shahpnmlab/easybuild-easyblocks
Collection of easyblocks that implement support for building and installing software with EasyBuild.
shahpnmlab/AreTomo2
shahpnmlab/AreTomo3
Live processing and real time reconstruction of cryo
shahpnmlab/learn_cryoem_math
shahpnmlab/LocMemCurv
Measure local curvature of membranes
shahpnmlab/mdocfile
SerialEM mdoc files as pandas dataframes
shahpnmlab/pytorch-3dunet
3D U-Net model for volumetric semantic segmentation written in pytorch
shahpnmlab/relion_display
Print out labels in the relion display window
shahpnmlab/warp