Pinned Repositories
B-SOID
Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with supervised classification to achieve fast predictions of behaviors that are not predefined by users.
confapp
This package manage configurations files using a singleton.
flyhostel
fslretho
GUI to the Rethomics suite for easy interpretation of ethoscope and DAM datasets
idoc_docs
idtrackerai
Fork of https://gitlab.com/polavieja_lab/idtrackerai
pythonvideoannotator-models-gui
sdeconv
2D and 3D image deconvolution with python
torchtest
vidio
simple, performant video reading and writing in python
shaliulab's Repositories
shaliulab/confapp
This package manage configurations files using a singleton.
shaliulab/navis
Python 3 library for Neuron Analysis and Visualization
shaliulab/pythonvideoannotator-models-gui
shaliulab/torchtest
shaliulab/baslerpi
Repository for a Python convenience wrapper around the pypylon module to interact with Basler cameras
shaliulab/behavr
Data structure to store and manipulate high throughput behavioural data in R
shaliulab/damr
Read TriKinetics' DAM data in R
shaliulab/DeepLabCut-live-GUI
GUI to run DeepLabCut on live video feed
shaliulab/DetetctingActionStarts
Detecting the starting frame of actions in video.
shaliulab/dropbox-api-content-hasher
Code to compute the Dropbox API's "content_hash"
shaliulab/dropy
shaliulab/esquisse
shaliulab/ethoscope-imager
shaliulab/fictrac
FicTrac: A webcam-based method for tracking spherical motion and generating fictive animal paths.
shaliulab/ggetho
Visualise high throughput behavioural data in R, based on ggplot2
shaliulab/idvalidator
shaliulab/mkdocs-tutorial
shaliulab/mpv-scripts
shaliulab/pythonvideoannotator-models
shaliulab/shaferlab-ethoscope
shaliulab/snakemk_util
shaliulab/task-spooler
A scheduler for GPU/CPU tasks
shaliulab/zeitgebr
Circadian rhythm analysis and visualisation in R