shawnlaffan/biodiverse

Issues

• randomisations: add proximity swapper

  #948 opened a month ago by shawnlaffan
  1

• GUI randomisations: allow spatial constraints, def queries etc for all algorithms

  #946 opened 2 months ago by shawnlaffan
  0

• CANAPE: Add super category

  #890 opened a year ago by eortizb
  3

• GUI analysis tabs: move the tree plot controls to the side menu

  #905 opened a year ago by shawnlaffan
  1

• GUI spatial tab - add all project trees to the tree chooser

  #909 opened a year ago by shawnlaffan
  1

• GUI tree plotting - add options for range weighted and equal branch length

  #911 opened a year ago by shawnlaffan
  1

• GUI: plot polygon overlays with fill colour

  #891 opened 2 months ago by shawnlaffan
  2

• GUI: List values from any related object in grid cell popups

  #942 opened 7 months ago by shawnlaffan
  0

• Cluster calcs per node: clear any previous results before re-running

  #924 opened 7 months ago by shawnlaffan
  0

• Tests: flag whether aliens are required or optional

  #937 opened 7 months ago by shawnlaffan
  0

• GUI: Add option to control the default tree branch line colour

  #935 opened 7 months ago by shawnlaffan
  0

• Packaging: use ExtUtils::MakeMaker::CPANfile

  #934 opened 7 months ago by shawnlaffan
  0

• GUI: unable to change basedata cellsize when origin is non-zero

  #928 opened 8 months ago by shawnlaffan
  1

• Clustering progress: change numeric format for most similar value

  #929 opened 8 months ago by shawnlaffan
  0

• Cluster tie breaker calculations - set pairwise mode

  #925 opened 9 months ago by shawnlaffan
  1

• calc_abc: don't change the element lists to hashes

  #919 opened 10 months ago by shawnlaffan
  0

• GUI - plot tree using depth across all tab types

  #906 opened a year ago by shawnlaffan
  1

• GUI visualisation tabs - add option to export current tree

  #902 opened a year ago by shawnlaffan
  1

• GUI Export interface disables keyboard shortcuts when cancelled

  #908 opened a year ago by shawnlaffan
  1

• Feature request: Table of diversity indices with index properties

  #889 opened a year ago by vmikk
  4

• Issues - convert hierarchical labels to lists

  #900 opened a year ago by shawnlaffan
  0

• Indices: ensure trees have non-negative branch lengths

  #896 opened a year ago by shawnlaffan
  0

• Installation on MaxOS Intel: from source impossible + source-install brew library messing BiodiverseGUI

  #869 opened a year ago by FranckLejzerowicz
  8

• GUI does not start under macOS Sonoma

  #888 opened a year ago by luishdez35
  6

• Generalise basedata trimming to handle all types

  #880 opened a year ago by shawnlaffan
  1

• analyses - calculate SHA digests of labels per group

  #870 opened a year ago by shawnlaffan
  1

• Basedata: use GetFeatureCount in shapefile imports

  #885 opened a year ago by shawnlaffan
  0

• Spreadsheet imports: Add Excel::ValueReader::XLSX backend

  #882 opened a year ago by shawnlaffan
  0

• GUI: spreadsheet imports ignore selected sheet

  #881 opened a year ago by shawnlaffan
  0

• Trees: export to R phylo structure

  #877 opened a year ago by shawnlaffan
  1

• paths - replace Path::Class with Path::Tiny

  #853 opened a year ago by shawnlaffan
  0

• Indices - Local PD fails when there are no branches in the sample

  #873 opened a year ago by shawnlaffan
  0

• Indices - add Hurlbert, ES50, ES100 etc

  #868 opened a year ago by shawnlaffan
  1

• Warn when imported basedata could be geographic data imported using default cell sizes

  #872 opened 2 years ago by shawnlaffan
  0

• Indices - add Hurlbert's ES50, ES100 etc

  #871 opened 2 years ago by shawnlaffan
  0

• Matrices - summary stats are imprecise

  #866 opened 2 years ago by shawnlaffan
  0

• auto-remaps - consider Text::Levenshtein::Flexible

  #863 opened 2 years ago by shawnlaffan
  1

• auto-remaps - skip impossible comparisons

  #864 opened 2 years ago by shawnlaffan
  0

• Release 4.3 checklist

  #861 opened 2 years ago by shawnlaffan
  0

• Randomisations - change p-rank approach, update GUI colouring like z-scores

  #856 opened 2 years ago by shawnlaffan
  1

• reduce resolution has precision issues

  #859 opened 2 years ago by shawnlaffan
  0

• GUI - zscore colouring is reversed relative to legend

  #857 opened 2 years ago by shawnlaffan
  0

• Release 4.2 checklist

  #854 opened 2 years ago by shawnlaffan
  1

• Raster imports - use band names when requested

  #852 opened 2 years ago by shawnlaffan
  0

• raster imports: nodata=NaN is not treated as a number

  #851 opened 2 years ago by shawnlaffan
  0

• GUI - cannot highlight branches in view labels tab

  #850 opened 2 years ago by shawnlaffan
  0

• Custom shapefile support

  #849 opened 2 years ago by vmikk
  0

• randomisations - support new_seed argument

  #848 opened 2 years ago by shawnlaffan
  0

• Release 4.1 checklist

  #847 opened 2 years ago by shawnlaffan
  0

• Basedata delimited text imports: support field names

  #846 opened 2 years ago by shawnlaffan
  0