shelkmike

Google Scholar: https://scholar.google.ru/citations?user=cA3yIeMAAAAJ&hl=en

Institute for Information Transmission Problems; Skolkovo Institute of Science and TechnologyMoscow, Russia

Pinned Repositories

biostar-central
Biostar Q&A
Language:Python583 32 456230
igv.js
Embeddable genomic visualization component based on the Integrative Genomics Viewer
Language:HTML650 34 1.2k230
samtools
Tools (written in C using htslib) for manipulating next-generation sequencing data
Language:C1.6k 100 1.3k580
Dot_plot_like_in_BLAST
Dot_plot_like_in_BLAST, a standalone tool for making dot plots similar to what online BLAST makes.
Language:Python1 1 10
Elloreas
Elloreas, a genome assembler
Language:Perl0 1 10
Galyp
Genome assembly and post-assembly processing pipeline
Language:Shell1 1 00
Mabs
Mabs, a genome assembly tool which optimizes parameters of Hifiasm and Flye
Language:C26 3 82
Modified_porechop
A version of Porechop which can use FASTA files with adapters
Language:C++30
NTproc
A tool for processing of Nanopore transcriptome reads
Language:Perl1 1 00
shelkmike
Config files for my GitHub profile.
0 1 00

shelkmike/Mabs
Mabs, a genome assembly tool which optimizes parameters of Hifiasm and Flye
Language:C26 3 82
shelkmike/Modified_porechop
A version of Porechop which can use FASTA files with adapters
Language:C++30
shelkmike/Dot_plot_like_in_BLAST
Dot_plot_like_in_BLAST, a standalone tool for making dot plots similar to what online BLAST makes.
Language:Python1 1 10
shelkmike/Galyp
Genome assembly and post-assembly processing pipeline
Language:Shell1 1 00
shelkmike/NTproc
A tool for processing of Nanopore transcriptome reads
Language:Perl1 1 00
shelkmike/Elloreas
Elloreas, a genome assembler
Language:Perl0 1 10
shelkmike/shelkmike
Config files for my GitHub profile.
0 1 00