Take bams as input
Opened this issue · 1 comments
delocalizer commented
It'd be nice to be able to supply the test and control bam directly as inputs, and walk them in step with e.g. pysam pileup iterators
shimbalama commented
Agreed. I had the same thought back in my QIMR days. The original
requirement was from pileup though, and at this point I can't see myself
having the time to make that big of a change.
Has the paper progressed?
Cheers Liam
PS. 🐟
…On Mon, 31 Oct 2022, 4:11 pm Conrad Leonard, ***@***.***> wrote:
It'd be nice to be able to supply the test and control bam directly as
inputs, and walk them in step with e.g. pysam pileup iterator
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