Pinned Repositories
batch-blast-bias
convenient scripts for batch blast search on NIBB bias
ez_batch
ezgff_alpha
genome_annot
genome annotation
getseq
A utility to retrieve biological sequences from public and local databases.
mapp2g
mapp2g is the tool to map protein sequences to genome references in a splicing-aware way.
OkORF
Predict ORFs in transcriptome sequences, e.g. RNA-seq de novo assembly.
shujishigenobu's Repositories
shujishigenobu/batch-blast-bias
convenient scripts for batch blast search on NIBB bias
shujishigenobu/ez_batch
shujishigenobu/ezgff_alpha
shujishigenobu/genome_annot
genome annotation
shujishigenobu/getseq
A utility to retrieve biological sequences from public and local databases.
shujishigenobu/mapp2g
mapp2g is the tool to map protein sequences to genome references in a splicing-aware way.
shujishigenobu/3d-dna-sldev
A fork of 3d-dna repository
shujishigenobu/academic-kickstart
📝 Easily create a beautiful website using Academic, Hugo, and Netlify
shujishigenobu/academic-kickstart2
shujishigenobu/automated-build-test
shujishigenobu/batch-iprscan-bias
shujishigenobu/codespaces_first_trial
shujishigenobu/du-aws_s3_inventory
shujishigenobu/du_aws_s3_inventory_gem
shujishigenobu/EDGE
EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.
shujishigenobu/ercc
shujishigenobu/evo2014ngs
shujishigenobu/fast
utility collection to manipulate FASTA data
shujishigenobu/FlybaseFactory
utilities to manipulate FlyBase data
shujishigenobu/gem_sample_pruby_200502
shujishigenobu/gff_factory
shujishigenobu/ncbi_datasets_ruby_alpha
shujishigenobu/ngs-pipeline
Tools for NGS analyses
shujishigenobu/omics-collab-cm-nibb
shujishigenobu/openbd_ruby_alpha
shujishigenobu/rails-contigdb_pame3
shujishigenobu/RsGM8db
shujishigenobu/sample_gem
shujishigenobu/sinatra-tcplot
shujishigenobu/tiny-test-data
Super small biological datasets for unit testing