shwohl

Pinned Repositories

• linux-learning

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• COVIDScenarioPipeline

  Public shared code for doing scenario forecasting and creating reports for various governmental entities.

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• flepiMoP

  The Flexible Epidemic Modeling Pipeline

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• illumina-vc

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• minion-covid

  MinION bioinformatics pipeline for un-targeted sequencing of SARS-CoV-2

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• minion-vc

  Bioinformatics pipeline for Oxford Nanopore sequencing of Vibrio cholerae

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• phylosamp

  The R package 'phylosamp' implements novel tools that estimate the probability of transmission between two cases given phylogenetic linkage and sample size calculations for phylogenetic studies.

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• VOCsamplesize

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• jhu-covid-pipeline

  Viral Genomics Pipeline in use at JHU

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• ncov

  ncov work

  Language:Shell2800

shwohl's Repositories