Pinned Repositories
aDNA2019
Exercises and slides for F stats and admixture graphs
allWolf
Greenland wolf and dog genetics
AncientImputationTesting
badwolf
A Vim color scheme.
Begum
Updated version of Damian
bio-playground
miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.
cfw
R code implementing QTL mapping of physiological, behavioral and gene expression phenotypes in Carworth Farms White (CFW) outbred mice.
DAMe
DAMe: A Toolkit for the Initial Filtering Steps on Complex Datasets of PCR replicates from Pooled Double-tagged Amplicons for DNA Metabarcoding Analyses
MobiSeq
Mobile element sequencing
YMBS_DAMe
Data and processing steps for YMBS DAMe day
shyamsg's Repositories
shyamsg/wolfInbreeding
Inbreeding estimates from the Swedish wolf that was used for the reference genome.
shyamsg/elephants
Gene flow in the mammoth-asian elephant clade
shyamsg/PotatoBlight
Clonal reproduction project for potato blight
shyamsg/rainforest
Rosalia's rainforest trees project.
shyamsg/PyMigration
Python implementation of the migration estimate project
shyamsg/DemographyRareVar
Demography using rare variants across populations
shyamsg/DXApps
DnaNexus apps
shyamsg/Migration
Project to estimate migration using an amalgamation of Jody Hey's and Li-Durbin method.