Pinned Repositories
aDNA2019
Exercises and slides for F stats and admixture graphs
allWolf
Greenland wolf and dog genetics
AncientImputationTesting
badwolf
A Vim color scheme.
Begum
Updated version of Damian
bio-playground
miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.
cfw
R code implementing QTL mapping of physiological, behavioral and gene expression phenotypes in Carworth Farms White (CFW) outbred mice.
corvids
Analysis of corvid data
MobiSeq
Mobile element sequencing
YMBS_DAMe
Data and processing steps for YMBS DAMe day
shyamsg's Repositories
shyamsg/Begum
Updated version of Damian
shyamsg/aDNA2019
Exercises and slides for F stats and admixture graphs
shyamsg/MobiSeq
Mobile element sequencing
shyamsg/YMBS_DAMe
Data and processing steps for YMBS DAMe day
shyamsg/allWolf
Greenland wolf and dog genetics
shyamsg/AncientImputationTesting
shyamsg/badwolf
A Vim color scheme.
shyamsg/bio-playground
miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.
shyamsg/cfw
R code implementing QTL mapping of physiological, behavioral and gene expression phenotypes in Carworth Farms White (CFW) outbred mice.
shyamsg/corvids
Analysis of corvid data
shyamsg/RhinoProcessing
Gore them all
shyamsg/DAMe
DAMe: A Toolkit for the Initial Filtering Steps on Complex Datasets of PCR replicates from Pooled Double-tagged Amplicons for DNA Metabarcoding Analyses
shyamsg/DataScienceCourse
shyamsg/diversityMap
Map of diversity - Andreia and Sen's project
shyamsg/DNAMark
Code for website deployment for DNAMark
shyamsg/elephants
Gene flow in the mammoth-asian elephant clade
shyamsg/JellyBelly
Toolset for vectorizing sequence data via spaced kmers
shyamsg/linked-selection
shyamsg/lions
Analysis of lion sequences for Ross' and Lis' project
shyamsg/MobiSeq-Workshop
Analysis pipeline for MobiSeq data
shyamsg/plantago
Plantago code and analysis
shyamsg/popgen19
Lecture and exercise for GWAS workshop - Sydney 2019
shyamsg/PopGenPyVCF
shyamsg/pretty-dropdowns
A simple, lightweight jQuery plugin to create stylized drop-down menus.
shyamsg/SantasHelpers
Miscellaneous scripts + odds/ends for making life easier analysis genetic data
shyamsg/shyamsg.github.io
shyamsg/taino
Analysis of the taino genome
shyamsg/taxman
shyamsg/wolfInbreeding
Inbreeding estimates from the Swedish wolf that was used for the reference genome.
shyamsg/wolfRefGenome
Comparison of wolf to dog reference genome for impact on downstream analyses