Pinned Repositories
nf-core-rnaseq
See the main fork of this repository here >>>
rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
rnadeseq
Differential gene expression analysis and pathway analysis of RNAseq data
carveme
CarveMe: genome-scale metabolic model reconstruction
r-analysis-templates
Templates for pipeline downstream analysis with R and project reports with knitR
rnadeseq
Downstream differential gene expression analysis with DESeq2 package
rnaseq
RNA sequencing analysis pipeline using STAR or HISAT2, with gene counts and quality control
sarek
Analysis pipeline to detect germline or somatic variants from WGS / targeted sequencing
Subread_to_DEXSeq
A way to use FeatureCounts output for DEXSeq
vorkurs
silviamorins's Repositories
silviamorins/rnadeseq
Downstream differential gene expression analysis with DESeq2 package
silviamorins/carveme
CarveMe: genome-scale metabolic model reconstruction
silviamorins/r-analysis-templates
Templates for pipeline downstream analysis with R and project reports with knitR
silviamorins/rnaseq
RNA sequencing analysis pipeline using STAR or HISAT2, with gene counts and quality control
silviamorins/sarek
Analysis pipeline to detect germline or somatic variants from WGS / targeted sequencing
silviamorins/Subread_to_DEXSeq
A way to use FeatureCounts output for DEXSeq
silviamorins/vorkurs