simexin

Shanghai, China

Pinned Repositories

1000Genomes_data_indexes
The index files for sequence and other data created for the 1000 Genomes project and the International Genome Sample Resource
0 1 00
996.ICU
Repo for counting stars and contributing. Press F to pay respect to glorious developers.
Language:Rust0 2 00
abra
Assembly Based ReAligner
Language:Java0 2 00
active_admin
The administration framework for Ruby on Rails applications.
Language:Ruby0 1 00
AdminLTE
AdminLTE - Free Premium Admin control Panel Theme That Is Based On Bootstrap 3.x
Language:JavaScript0 1 00
alignment-and-variant-calling-tutorial
basic walk-throughs for alignment and variant calling from NGS sequencing data
0 1 00
alipay
An Unofficial Alipay API for Python
Language:Python0 1 00
alipay-dev-docs
Alipay dev docs downloaded from its official website
0 1 00
seqtk
Toolkit for processing sequences in FASTA/Q formats
Language:C1 2 00

simexin's Repositories

simexin/seqtk
Toolkit for processing sequences in FASTA/Q formats
Language:C1 2 00
simexin/abra
Assembly Based ReAligner
Language:Java0 2 00
simexin/alipay
An Unofficial Alipay API for Python
Language:Python0 1 00
simexin/alipay-dev-docs
Alipay dev docs downloaded from its official website
0 1 00
simexin/avxsynth
Linux Port of Avisynth
Language:C++1 0
simexin/bamsurgeon
tools for adding mutations to existing .bam files, used for testing mutation callers
Language:Python
simexin/bash-it
A community bash framework.
Language:Shell1 0
simexin/bcbio-nextgen
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
Language:Python1 0
simexin/bedtools2
A powerful toolset for genome arithmetic.
Language:C++
simexin/ctci
Cracking the Coding Interview
Language:Java
simexin/echarts
Enterprise Charts | Github pages : http://ecomfe.github.io/echarts/index-en.html | Email : echarts@baidu.com | Baidu Hi : 1379172 |
Language:JavaScript1 0
simexin/genome
Core modules used by the GMS
Language:Perl 61 0
simexin/gms
The Genome Modeling System installer (BETA).
Language:Perl
simexin/hap.py
Haplotype VCF comparison tools
Language:C++1 0
simexin/hgvs
HGVS variant name parsing and generation
Language:Python
simexin/hts-specs
Specifications of SAM/BAM and related high-throughput sequencing file formats
Language:TeX2 0
simexin/impress
Impress Application Server for node.js. All decisions are made. Solutions are scaled. Tools are provided and optimized for high load. Ready for applied development and production.
Language:JavaScript
simexin/Interview_Problems
Example coding interview problems found through online resources, Cracking the Code book, mentors and colleagues. An additional robust resource for example interview questions and solutions is at https://github.com/mmihaljevic/algortihms_challenges.
Language:Python1 0
simexin/io-2012-slides
Automatically exported from code.google.com/p/io-2012-slides
Language:CSS
simexin/isbnlib
python library to validate, clean, transform and get metadata of ISBN strings (for devs).
Language:Python
simexin/isbntools
python app/framework for 'all things ISBN' including metadata, descriptions, covers...
Language:Python
simexin/minimal_representation
Convert genetic variants to minimal representation
Language:Python1 0
simexin/moment
Parse, validate, manipulate, and display dates in javascript.
Language:JavaScript1 0
simexin/mutalyzer
HGVS variant nomenclature checker
Language:Python
simexin/reveal.js
The HTML Presentation Framework
Language:JavaScript
simexin/tensorflow
Open source software library for numerical computation using data flow graphs.
Language:C++
simexin/vcftools
A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project.
Language:C++2 0
simexin/vt
A tool set for short variant discovery in genetic sequence data.
Language:C1 0
simexin/wgsim
Reads simulator
Language:C
simexin/XX-Net
接力GoAgent
Language:Python