sjcarmona

Computational biologist, research group leader at University of Lausanne. Systems Immunology, Single-cell genomics, Immuno-Oncology

Ludwig Cancer Research, University of Lausanne & Swiss Institute of BioinformaticsLausanne, Switzerland

Pinned Repositories

GeneNMF
Methods to discover gene programs on single-cell data
Language:R70 2 123
ProjecTILs
Interpretation of cell states using reference single-cell maps
Language:R245 9 8828
ProjecTILs_CaseStudies
A repository of case studies using ProjecTILs
Language:R12 3 03
scGate
marker-based purification of cell types from single-cell RNA-seq datasets
Language:R88 5 2712
SignatuR
A database of useful gene signatures for single-cell analysis
Language:R20 1 50
STACAS
R package for semi-supervised single-cell data integration
Language:R74 5 329
TILPRED
Tumor-Infiltrating CD8 Lymphocytes states prediction
Language:R12 2 13
UCell
Gene set scoring for single-cell data
Language:R135 5 4016
shiny
Language:HTML0 0 00
workflow_CD8TIL_B16_ss2
Language:R00

sjcarmona's Repositories

sjcarmona/shiny
Language:HTML0 0 00
sjcarmona/workflow_CD8TIL_B16_ss2
Language:R00