Pinned Repositories
alternative_tribeMCL
ATACseq_analysis_Zenodo
Scripts and commands of ATAC-seq analysis for Zenodo repository
basic_fri_2024
Ding_etal_2019_CAP_I
gene-cluster-matrix
Visualize gene clusters & its phylogenetic relationships by interactive matrix figure.
GxE_analysis
Script of statistical test for GxE analysis
NLRtracker
NLR annotation tool
Phylogenetic_distance_plot2
Plant_Innate_Immunity_ATAC-seq
RILStEp
Detect epistasis candidate SNP pair based on bayes factor
slt666666's Repositories
slt666666/NLRtracker
NLR annotation tool
slt666666/gene-cluster-matrix
Visualize gene clusters & its phylogenetic relationships by interactive matrix figure.
slt666666/RILStEp
Detect epistasis candidate SNP pair based on bayes factor
slt666666/GxE_analysis
Script of statistical test for GxE analysis
slt666666/alternative_tribeMCL
slt666666/ATACseq_analysis_Zenodo
Scripts and commands of ATAC-seq analysis for Zenodo repository
slt666666/basic_fri_2024
slt666666/basic_info_2023
slt666666/basic_informatics_2022
slt666666/Ding_etal_2019_CAP_I
slt666666/Distance_based_matrix
generate matrix plot
slt666666/FAO_lecture
FAO_lecture materials
slt666666/Phylogenetic_distance_plot2
slt666666/Plant_Innate_Immunity_ATAC-seq
slt666666/D_radicosa_genome
Commands and Scripts for D.radicosa ref genome paper
slt666666/GRN_inference
slt666666/informatics_agri_1st
slt666666/MADA_motif_protocol
slt666666/mimb_ATAC-seq
slt666666/mysite
slt666666/Network
For NLR Network analysis
slt666666/NLR_biology_workshop_2024
slt666666/NLRome_render
slt666666/NRC0
Source code for NRC0 paper (Sakai et al., 202X)
slt666666/Phenotyping_RILStEp
slt666666/Phylogenetic_distance_plot
slt666666/question_spreadsheet
slt666666/RNAseq_basic_protocol
slt666666/Seed_phenotyping
slt666666/ThreeDRNAseq
A shiny App for differential expression and differential alternative splicing analysis