Pinned Repositories
BerkeleyPhotonicInverseDesign
Continuous Adjoint Optimization with Lumerical, developed at UC Berkeley
compressive-sensing-Gerchberg-Saxton
Software implementation of multiple algorithms for the generation of 3D optogenetics photostimulation patterns with phase-only spatial light modulators
DataAcquisition
MATLAB graphical user interface for viewing and recording data using a National Instruments DAQ, tested specifically for the NI USB-6003.
fast-bonito
hedges
HEDGES Error Correcting Code for DNA
HMM
Hidden Markov models for biological time-series data, implemented from scratch in Matlab
jetson_nanopore_sequencing
A place to collate notes and resources of our journey into porting nanopore sequencing over to accessible, portable technology.
LDPC_DNA_storage
LDPC codes for Illumina sequencing-based DNA storage
MagneticTweezers
A single-molecule manipulation instruments that utilize a magnetic field to apply force to a biomolecule-tethered magnetic bead.
master_of_pores
Nextflow pipeline for analysis of direct RNA Nanopore reads
smeanapole's Repositories
smeanapole/metalens
Design, optimize, & simulate metasurface lenses (aka diffractive lenses), beam deflectors, gratings etc