Annotate zero confidence positions in structural reads
douweschulte opened this issue · 1 comments
douweschulte commented
Just exchange the sequence with X when the confidence is 0.
douweschulte commented
Not sure what this would add, when the score is zero it is not taken anyway for any consensus alignment. The only help would be in sequence alignment, Xs are placed anywhere while the original AA could shift the alignment into a worse one.