soft-matter/trackpy

Issues

• `memory` not stable between runs

  #776 opened 2 months ago by freemansw1
  0

• Error in walkthrough guide during particle filtering

  #775 opened 4 months ago by imruffin
  0

• Incorrect zeros included in emsd average when particles are dropped

  #772 opened 4 months ago by vivarose
  1

• Working on a napari-trackpy plugin

  #741 opened a year ago by joaomamede
  2

• trackpy.batch only works with processes = 1

  #771 opened 5 months ago by ggomes-altos
  2

• Trackpy incompatible with Numpy 2.0

  #768 opened 6 months ago by SiFroehl
  3

• track

  #769 opened 6 months ago by iboykaka
  0

• Release v0.6.3

  #765 opened 7 months ago by nkeim
  0

• `plot_traj3d` throws error

  #759 opened 7 months ago by jacopoabramo
  0

• [Question] How to add optional arguments in after_locate function in tp.batch

  #764 opened 7 months ago by JulietteSavoye
  1

• Use pims.as_grey instead of image[:, :, 1] in walkthrough tutorial.

  #752 opened a year ago by kevinsmia1939
  0

• Error in trackpy.emsd() function: TypeError: mean() got an unexpected keyword argument 'level'

  #757 opened 7 months ago by Jelle111
  5

• Tutorial shows problem using latest pandas

  #750 opened 7 months ago by jmcclimo2003
  2

• TST: Need to replace a GitHub action

  #755 opened 7 months ago by nkeim
  0

• Locate only within specific ROI

  #760 opened 7 months ago by PabloAu
  2

• [Enhancement] Allowing possibility to convert raw image to `uint16`

  #762 opened 8 months ago by jacopoabramo
  0

• [Question] methods for initial estimation of `minmass`

  #761 opened 8 months ago by jacopoabramo
  1

• tp.batch does not perform batch correctly (all frames output as 0)

  #756 opened 10 months ago by joaomamede
  3

• Release v0.6.2

  #748 opened 10 months ago by nkeim
  5

• Old Python version in installation instructions

  #753 opened 10 months ago by nkeim
  0

• Linking using multiple HDF5 files.

  #751 opened a year ago by wheelern
  1

• TST: Weird dtype switching on Windows

  #744 opened a year ago by nkeim
  2

• level keyword argument was removed in pandas>2.0

  #746 opened a year ago by Pawelbure
  1

• link_df_iter giving TypeError when using pd.concat?

  #745 opened a year ago by zimengwu
  0

• tp.emsd TypeError: mean() got an unexpected keyword argument 'level'

  #738 opened a year ago by susuwataridib
  7

• pandas 2.0 breaks emsd calculation

  #730 opened a year ago by yichechang
  2

• object has no attribute 'long_name' (when inspecting 'frame')

  #737 opened 2 years ago by rodrigo-j-goncalves
  2

• How to find number of pixels in blob

  #736 opened 2 years ago by zbenmamoun
  0

• Pandas ValueError when calling subtract_drift

  #734 opened 2 years ago by kevin-duclos
  1

• Detector based on the sqrt Airy disk function to localize iSCAT PSFs

  #733 opened 2 years ago by PabloAu
  0

• The number of trajectories is different from the number of unique particle IDs

  #732 opened 2 years ago by lxfhfut
  2

• Is the particle size squared a suitable measure of area?

  #731 opened 2 years ago by zbenmamoun
  0

• How do you save the images TrackPy creates for reports

  #729 opened 2 years ago by Rory235
  5

• Error in eccentricity calculation

  #728 opened 2 years ago by AlexShkarin
  0

• Trackpy.link search range and memory

  #727 opened 2 years ago by DaphneEPFL
  0

• Using trackpy.batch() on bioformats images in parallel

  #726 opened 2 years ago by MMarkovetz
  0

• Can you use trackpy in cases when local position is not as important as shape of objects?

  #725 opened 2 years ago by karllandheer
  1

• Release v0.6.0 and v0.6.1

  #722 opened 2 years ago by nkeim
  2

• Confidance evaluation of the tracking

  #714 opened 2 years ago by Ciro1990
  3

• link_strategy explanation

  #712 opened 2 years ago by Ciro1990
  2

• Feature request: Filter tracks by x or y displacement

  #713 opened 2 years ago by Rory235
  4

• 'size' and 'ep' not given per dimension if diameter is the same in all dimensions

  #716 opened 2 years ago by MaartenBransen
  0

• trackpy.motion.diagonal_size

  #715 opened 2 years ago by Rory235
  0

• Calling tp.link on pre-segmented objects

  #711 opened 2 years ago by Ciro1990
  4

• Writing annoted TIFF stack to file without `matplotlib` frame

  #702 opened 2 years ago by jacopoabramo
  2

• Can trackpy be used for backward dispersion modeling?

  #708 opened 2 years ago by goldma99
  0

• Particles with the same distance

  #707 opened 2 years ago by snilsn
  6

• Remove a specific particle from my datas

  #704 opened 2 years ago by Alex-code-lab
  2

• multiprocessing "start method" issue on Windows

  #703 opened 2 years ago by Alex-code-lab
  0

• issue in Imsd results

  #705 opened 2 years ago by Alex-code-lab
  0