Pinned Repositories
BrAPI-js
JavaScript BrAPI Client with support for asynchronous interdependent calls.
BrAPI-Pedigree-Viewer
breedbase_dockerfile
The Dockerfiles for breeDBase
Cview
A comparative genetic map viewer
cxgn-corelibs
Various Modules relating to SGN
d3-pedigree-tree
A D3.js layout for visualizing pedigree trees.
Phenome
Scripts and libraries for managing the SGN Phenome database
sgn
The code behind the Sol Genomics Network, Cassavabase and other Breedbase websites
SNPbinner
SNPbinner is a utility for the generation of genotype crossover points and binmaps based on SNP data across recombinant inbred lines.
starmachine
Shared management machinery for PSGI web apps running with Starman.
Breedbase and Solgenomics's Repositories
solgenomics/sgn
The code behind the Sol Genomics Network, Cassavabase and other Breedbase websites
solgenomics/cxgn-corelibs
Various Modules relating to SGN
solgenomics/breedbase_dockerfile
The Dockerfiles for breeDBase
solgenomics/Tea
code and database for the expression query, mining, analysis, and visualization tools
solgenomics/bio-chado-schema
A standard DBIx::Class layer for the Chado database schema. Bootstrapped and updated using DBIx::Class::Schema::Loader.
solgenomics/cassava
Cassavabase - A website for Cassava research
solgenomics/citrusgreening
user interface for the citrusgreening site https://citrusgreening.org/
solgenomics/musabase
solgenomics/perl-local-lib
Git repository for Perl local-lib for faster installs (eg. Dockerfiles)
solgenomics/solgenomics
The mason components needed to run the solgenomics.net website
solgenomics/yambase
web interface for Yambase database
solgenomics/breedbase_compute_node
solgenomics/breedbase_site
Minimum install for Breedbase
solgenomics/cassava-devel.sgn.cornell.edu
solgenomics/cassbase
The mason components for the cassbase database, a variation of cassavabase for the CASS project
solgenomics/citrus
solgenomics/crispget
solgenomics/erysimum
Website for Erysimum genomes
solgenomics/gbsappui
A user interface for GBSapp that can be integrated into Breedbase
solgenomics/inventory.breedbase.org
a breedbase instance for a crop agnostic inventory management system for BI OnRamp
solgenomics/milkweed
solgenomics/nicotianabase
Nicotiana base
solgenomics/pawpaw.breedbase.org
solgenomics/post-composing-paper
This is a repo to help build queries and tables for the post-composing paper
solgenomics/R_libs
Compiled R dependencies for Solgenomics & Breedbase databases, for faster install of docker etc.
solgenomics/schemaspy
contains output of schemaspy tool
solgenomics/sugarcane
solgenomics/sugarcane-industry
solgenomics/sugarcane-training.breedbase.org
the training site for sugarcane
solgenomics/test.cassbase.org
the test site for CassBase