Pinned Repositories
Clinfo.AI
This is Clinfo.AI Demo Instruction
ehr-rwe
Weak supervision methods for extracting real world evidence from EHRs
ehr_ml
Code for doing machine learning with various EHRs
ehrshot-benchmark
A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)
femr
FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health records
INSPECT_public
INSPECT dataset/benchmark paper, accepted by NeurIPS 2023
medalign
MedAlign is a clinician-generated dataset for instruction following with electronic medical records.
psych-audio
Analyzing the language of psychotherapy
psych-nlp
Methods for measuring and analyzing therapist language
trove
Weakly supervised medical named entity classification
som-shahlab's Repositories
som-shahlab/ehrshot-benchmark
A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)
som-shahlab/femr
FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health records
som-shahlab/medalign
MedAlign is a clinician-generated dataset for instruction following with electronic medical records.
som-shahlab/Clinfo.AI
This is Clinfo.AI Demo Instruction
som-shahlab/INSPECT_public
INSPECT dataset/benchmark paper, accepted by NeurIPS 2023
som-shahlab/ehr_ml
Code for doing machine learning with various EHRs
som-shahlab/aplusml
APLUS ML = A Python Library for Usefulness Simulations of Machine Learning models
som-shahlab/survlearners
Metalearners for Survival Data
som-shahlab/motor_tutorial
Tutorial repository for the official MOTOR release
som-shahlab/TrialProbe
som-shahlab/clinical_trial_patient_matching-website
Public facing website for zero-shot CT patient matching paper
som-shahlab/meds_reader
som-shahlab/temp_ds_shift_robustness
som-shahlab/clinical_trial_patient_matching
Zero-shot clinical trial matching with LLMs
som-shahlab/mimic_tutorial
som-shahlab/motor_code_release
som-shahlab/ehrshot-website
Public website for EHRSHOT
som-shahlab/manifest
Prompt programming with FMs.
som-shahlab/RATE-experiments
Code for reproducing the analyses that appear in "Evaluating Treatment Prioritization Rules via Rank-Weighted Average Treatment Effects"
som-shahlab/slurmtool
SLURM helper
som-shahlab/constdb-python
ConstDB is a very simple read-only embedded key-value database
som-shahlab/adult_ped_transfer_learning
som-shahlab/CLMBR-contrastive-learning
som-shahlab/data-align
Clinical text summarization by adapting large language models
som-shahlab/gpt4usmle
Tools for automated evaluation and generation of USMLE-style questions
som-shahlab/inspect-website
som-shahlab/medalign-website
Landing page and website for the MedAlign project
som-shahlab/pad
A repository for building and testing a simple PAD model
som-shahlab/pancreatic_cancer_tutorial
som-shahlab/shahlab-website
Shah Lab Jekyll website