som-shahlab

United States of America

Pinned Repositories

Clinfo.AI
This is Clinfo.AI Demo Instruction
Language:Jupyter Notebook26 6 38
ehr-rwe
Weak supervision methods for extracting real world evidence from EHRs
Language:Python32 7 15
ehr_ml
Code for doing machine learning with various EHRs
Language:C++21 8 223
ehrshot-benchmark
A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)
Language:Jupyter Notebook134 9 89
femr
FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health records
Language:Python104 14 8912
INSPECT_public
INSPECT dataset/benchmark paper, accepted by NeurIPS 2023
Language:Python23 8 32
medalign
MedAlign is a clinician-generated dataset for instruction following with electronic medical records.
87 21 19
psych-audio
Analyzing the language of psychotherapy
Language:Python19 11 06
psych-nlp
Methods for measuring and analyzing therapist language
Language:Python22 6 03
trove
Weakly supervised medical named entity classification
Language:Python70 6 521

som-shahlab's Repositories

som-shahlab/ehrshot-benchmark
A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)
Language:Jupyter Notebook134 9 89
som-shahlab/femr
FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health records
Language:Python104 14 8912
som-shahlab/medalign
MedAlign is a clinician-generated dataset for instruction following with electronic medical records.
87 21 19
som-shahlab/Clinfo.AI
This is Clinfo.AI Demo Instruction
Language:Jupyter Notebook26 6 38
som-shahlab/INSPECT_public
INSPECT dataset/benchmark paper, accepted by NeurIPS 2023
Language:Python23 8 32
som-shahlab/ehr_ml
Code for doing machine learning with various EHRs
Language:C++21 8 223
som-shahlab/aplusml
APLUS ML = A Python Library for Usefulness Simulations of Machine Learning models
Language:Jupyter Notebook18 7 73
som-shahlab/survlearners
Metalearners for Survival Data
Language:R13 6 321
som-shahlab/motor_tutorial
Tutorial repository for the official MOTOR release
Language:Jupyter Notebook8
som-shahlab/TrialProbe
Language:Jupyter Notebook6 3 00
som-shahlab/clinical_trial_patient_matching-website
Public facing website for zero-shot CT patient matching paper
Language:JavaScript4 5 0
som-shahlab/meds_reader
Language:C++4
som-shahlab/temp_ds_shift_robustness
Language:Jupyter Notebook3 6 00
som-shahlab/clinical_trial_patient_matching
Zero-shot clinical trial matching with LLMs
Language:Python2 5 03
som-shahlab/mimic_tutorial
Language:Python2
som-shahlab/motor_code_release
Language:Python2 5 0
som-shahlab/ehrshot-website
Public website for EHRSHOT
Language:SCSS1 5 01
som-shahlab/manifest
Prompt programming with FMs.
Language:Python1 1 0
som-shahlab/RATE-experiments
Code for reproducing the analyses that appear in "Evaluating Treatment Prioritization Rules via Rank-Weighted Average Treatment Effects"
Language:HTML1 5 0
som-shahlab/slurmtool
SLURM helper
Language:Python1
som-shahlab/constdb-python
ConstDB is a very simple read-only embedded key-value database
Language:Python0 1 00
som-shahlab/adult_ped_transfer_learning
Language:Jupyter Notebook6 0
som-shahlab/CLMBR-contrastive-learning
Language:Jupyter Notebook
som-shahlab/data-align
Clinical text summarization by adapting large language models
Language:Python0 0
som-shahlab/gpt4usmle
Tools for automated evaluation and generation of USMLE-style questions
Language:Jupyter Notebook
som-shahlab/inspect-website
Language:SCSS5 0
som-shahlab/medalign-website
Landing page and website for the MedAlign project
Language:HTML6 02
som-shahlab/pad
A repository for building and testing a simple PAD model
Language:Python4 0
som-shahlab/pancreatic_cancer_tutorial
Language:Jupyter Notebook5 0
som-shahlab/shahlab-website
Shah Lab Jekyll website
Language:HTML