Pinned Repositories
Visium_SPG_AD
Visium SPG AD project (n = 10) using Visium Spatial Proteogenomics (Visium-SPG) on dissections from the inferior temporal cortex (ITC) from Alzheimer's disease cases and controls.
ad_ml_exploration
biostat776-intro-sowmya-parthiban
My intro!
biostat840-intro-sowmya-parthiban
biostatmethods
Data and Code for Methods in Biostatistics in R
CFPB-
Classification of complaints from CFPB
Covid-Chest-X-Ray-Analysis-using-CNN
DLPFC
fasthpluspaper
Files for the fasthplus paper
SQL-for-genomic-datascience-
Queries that I came up with in SQL for an imaginary national spatial transcriptomics database.
sparthib's Repositories
sparthib/biostat776-intro-sowmya-parthiban
My intro!
sparthib/CFPB-
Classification of complaints from CFPB
sparthib/DLPFC
sparthib/fasthpluspaper
Files for the fasthplus paper
sparthib/ad_ml_exploration
sparthib/biostat840-intro-sowmya-parthiban
sparthib/DLPFC-image-processing
Image processing techniques for nuclei segmentation and denoising.
sparthib/SQL-for-genomic-datascience-
Queries that I came up with in SQL for an imaginary national spatial transcriptomics database.
sparthib/transfer-for-rl
RL experiments
sparthib/bookdown-temp
sparthib/custom_envs
sparthib/d3rlpy
A data-driven deep reinforcement learning library as an out-of-the-box tool
sparthib/DB-Final-Project
Database 615 Final project content Sowmya Parthiban, Aditya Khandeshi
sparthib/edgeR-exploration
Exploring the edgeR package for DE analysis
sparthib/ExData_Plotting1
Plotting Assignment 1 for Exploratory Data Analysis
sparthib/gym
A toolkit for developing and comparing reinforcement learning algorithms.
sparthib/hiperglm
For demonstrating effective development of high-performance stats software (JHSPH Biostatistics 140.778)
sparthib/L2N-exp
sparthib/nextflow
sparthib/nnSVG
nnSVG: scalable method to identify spatially variable genes (SVGs) in spatially-resolved transcriptomics data based on nearest-neighbor Gaussian processes (NNGPs)
sparthib/OSTA-book
"Orchestrating Spatially Resolved Transcriptomics Analysis with Bioconductor" (OSTA) online book
sparthib/public_sequin_data
sparthib/py-pr
sparthib/r_diseases
sparthib/r_tf
sparthib/RepData_PeerAssessment1
Peer Assessment 1 for Reproducible Research
sparthib/RL
sparthib/stats-comp-algo-software-2024
Course webpage for Biostat 140.778: Statistical Computing, Algorithm, and Software Development
sparthib/team_faces
Profile pictures (mostly from Twitter) from team members that I then re-use in presentations.
sparthib/tidylog
Tidylog provides feedback about dplyr and tidyr operations. It provides wrapper functions for the most common functions, such as filter, mutate, select, and group_by, and provides detailed output for joins.