sparthib

sparthib's Stars

• mrdbourke/pytorch-deep-learning

  Materials for the Learn PyTorch for Deep Learning: Zero to Mastery course.

  Language:Jupyter Notebook11.2k1132063.3k

• seandavi/awesome-single-cell

  Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

  3.2k24823989

• takuseno/d3rlpy

  An offline deep reinforcement learning library

  Language:Python1.3k27344244

• dataprofessor/code

  Compilation of R and Python programming codes on the Data Professor YouTube channel.

  Language:Jupyter Notebook93555261.4k

• mikelove/awesome-multi-omics

  List of software packages for multi-omics analysis

  737546163

• jonkrohn/DLTFpT

  Deep Learning with TensorFlow, Keras, and PyTorch

  Language:Jupyter Notebook593364348

• gpertea/stringtie

  Transcript assembly and quantification for RNA-Seq

  Language:C++3852843878

• MattChanTK/gym-maze

  A basic 2D maze environment where an agent start from the top left corner and try to find its way to the bottom left corner.

  Language:Python354714111

• zuoxingdong/mazelab

  A customizable framework to create maze and gridworld environments

  Language:Python2609959

• showteeth/ggcoverage

  Visualize and annotate genomic coverage with ggplot2

  Language:R22753320

• yfukasawa/LongQC

  LongQC is a tool for the data quality control of the PacBio and ONT long reads.

  Language:C14817618

• takuseno/d4rl-pybullet

  Datasets for data-driven deep reinforcement learning with PyBullet environments

  Language:Python1435211

• timkahlke/LongRead_tutorials

  Workflows and tutorials for LongRead analysis with specific focus on Oxford Nanopore data

  12561029

• kvittingseerup/IsoformSwitchAnalyzeR

  An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)

  Language:R103423718

• COMBINE-lab/oarfish

  long read RNA-seq quantification

  Language:Rust717123

• XueyiDong/LongReadBenchmark

  Benchmarking long-read RNA-seq analysis tools

  Language:R25232

• luciorq/isoformic

  Isoform-level functional RNA-Seq analysis 🧬

  Language:R21111

• csoneson/NativeRNAseqComplexTranscriptome

  Code for the paper "A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes"

  Language:R19315

• landau-lab/ONT-sc-splice

  Tools for detecting alternative splicing events and genotype in single-cell gene expression data.

  Language:R13212

• UK-SBCoA-EbbertLab/brain_cDNA_discovery

  Language:Jupyter Notebook11210

• tqian/parallel_qsub

  For qsub parallel jobs on the cluster "jhpce"

  Language:R2101

• aki-nishimura/stats-comp-algo-software-2024

  Course webpage for Biostat 140.778: Statistical Computing, Algorithm, and Software Development

  Language:C++111

• DayeaPark/Allele-specific-m6A-modification

  Language:Python1100

• sparthib/biostat776-intro-sowmya-parthiban

  My intro!

  1100

• sparthib/CFPB-

  Classification of complaints from CFPB

  1100

• sparthib/Covid-Chest-X-Ray-Analysis-using-CNN

  1100

• sparthib/DLPFC

  Language:HTML1100

• sparthib/fasthpluspaper

  Files for the fasthplus paper

  Language:R1000