ssciwr/hammingdist

Issues

• Result to a numpy / panda frame?

  #134 opened 7 months ago by jjkoehorst
  1

• wrong distance results for longer strings?

  #130 opened 10 months ago by lcareypando
  1

• Add optional cutoff distance

  #117 opened a year ago by lkeegan
  2

• Add CUDA implementation of distance function for NVIDIA GPUs

  #111 opened a year ago by lkeegan
  0

• Use GCD for multi-threading on macos

  #116 opened a year ago by lkeegan
  0

• Add NEON implementation of distance function for ARM cpus

  #110 opened a year ago by lkeegan
  0

• python 3.12 tests disabled until numpy 1.26

  #106 opened 2 years ago by lkeegan
  0

• modernize build system

  #91 opened 2 years ago by lkeegan
  0

• OpenMP not working in version 0.18.0

  #86 opened 2 years ago by lkeegan
  0

• support both uint8 and uint16 datatype for distances matrix

  #73 opened 3 years ago by lkeegan
  0

• add option to output count of duplicates for each input genome

  #72 opened 3 years ago by lkeegan
  0

• adjustable max distance

  #54 opened 3 years ago by lkeegan
  1

• feature request: distance between two sequences

  #44 opened 3 years ago by lkeegan
  0

• feature request: integer overflow behaviour

  #43 opened 3 years ago by lkeegan
  0

• feature request: distance from reference sequence

  #41 opened 3 years ago by lkeegan
  0

• Build Python package with OpenMP

  #17 opened 4 years ago by dokempf
  1

• update readme and/or add docs

  #19 opened 4 years ago by lkeegan
  0

• missing python tests

  #13 opened 4 years ago by lkeegan
  0

• request for change in processing of dashes

  #8 opened 4 years ago by lkeegan
  1

• Omit "equivalent" datasets from hamming distance calculation

  #12 opened 4 years ago by dokempf
  0

• Option to dump lower triangular matrix only.

  #11 opened 4 years ago by dokempf
  0

• `int` -> `uint16_t` for distances

  #9 opened 4 years ago by dokempf
  0

• Default `nsamples` in Python interface

  #10 opened 4 years ago by dokempf
  0

• Not specifying BUILD_TESTING leads to error

  #4 opened 4 years ago by dokempf
  2