ssolo/ALE

Issues

• Questions about the interpretation of ALE results

  #42 opened 7 months ago by wanxn518
  0

• Install error: bpp-phyl required but not found

  #27 opened a year ago by ssgituser
  14

• mpi still required for build

  #22 opened a year ago by EricDeveaud
  1

• geneFamily.treelist format

  #21 opened a year ago by ucassee
  2

• Docker version works on Windows, Compiled version throws NodePException error on Linux

  #17 opened a year ago by Biogeographer
  2

• terminate called after throwing an instance of 'bpp::NodePException'

  #32 opened a year ago by neptuneyt
  1

• Update the docker version?

  #29 opened a year ago by michoug
  4

• Error building docker image

  #24 opened a year ago by dcarrillox
  1

• Error when compiling ALE

  #23 opened a year ago by 007goodmans
  2

• Boost issues in conda

  #20 opened a year ago by Sebastien-Raguideau
  2

• Segmentation fault

  #26 opened a year ago by Jigyasa3
  3

• genefamily.tree file format

  #25 opened a year ago by Qiaojilim
  1

• could I install ALE using conda?

  #19 opened a year ago by ShuaiNIEgithub
  1

• bpp error in reading species tree

  #18 opened a year ago by Jigyasa3
  3

• bppexception during consensus tree calculation

  #33 opened a year ago by 444thLiao
  4

• Error when sampling reconciled gene trees

  #16 opened a year ago by GRealesM
  6

• Some problems with ALE

  #30 opened a year ago by Eco-Luozhh
  1

• How to parse ALEobserve output to retrieve CCP values

  #36 opened a year ago by Gullumluvl
  1

• Presence probabilities

  #35 opened a year ago by meiranmeiran
  1

• ALEml doesnot generate consensus tree

  #34 opened a year ago by meiranmeiran
  3

• About the aleml algorithm

  #14 opened a year ago by krishnansandeep1980
  0

• Error, file 1000 does not seem accessible.

  #37 opened a year ago by Biscuite-wzy
  2

• CCPscore returns -inf

  #39 opened a year ago by Gullumluvl
  2

• Support for NHX or RecPhyloXML

  #41 opened a year ago by Alexggo
  1

• Inferred frequencies greater than 1

  #38 opened a year ago by 473021677
  3

• tau flag not working?

  #40 opened a year ago by HGord2022
  3

• Some problems with ALE

  #31 opened 3 years ago by Eco-Luozhh
  0

• Install Error: no matching function for call to bpp::Parameter::Parameter()

  #28 opened 3 years ago by flass
  2

• error when computing consensus tree with ALEml

  #15 opened 5 years ago by flass
  1

• fractionMissing.h is missing

  #8 opened 8 years ago by maxemil
  4

• Example Data Set - Segfault after DTL rate optimisation started

  #9 opened 8 years ago by Hoembi
  2

• example_data explanations

  #7 opened 8 years ago by maxemil
  2

• ALE installation

  #4 opened 8 years ago by ag8525
  3

• Do we get the same likelihoods as before?

  #1 opened 8 years ago by ssolo
  0

• ALE installation OpenSUSE 42.2

  #6 opened 8 years ago by maxemil
  6

• missing file date.cpp

  #3 opened 9 years ago by tbigot
  1