mRNAmarkup is implemented as a bash script which should work on any Linux or UNIX system. Please see INSTALL for requirements of other software and specific set-up instructions.
If you want to avoid any installation hussles, the following will do nicely, using our mRNAmarkup Singularity container that encapsulates all scripts, programs, and system packages.
git clone https://github.com/BrendelGroup/mRNAmarkup
cd mRNAmarkup/
singularity pull http://BrendelGroup.org/SingularityHub/mRNAmarkup.sif
./xsetup
cd db
singularity exec -e -B ${PWD}/.. ../mRNAmarkup.sif bash 0README
cd ..
cd data
singularity exec -e -B ${PWD}/.. ../mRNAmarkup.sif ./xtest
xdiff
manuscript to be submitted
Please direct all comments and suggestions to Volker Brendel at Indiana University.