Pinned Repositories
imagej-launcher
The ImageJ native launcher
imagej-ops
ImageJ Ops: "Write once, run anywhere" image processing
tutorials
ImageJ2 programming examples
imglib2
A generic next-generation Java library for image processing
figurej
ImageJ plugin for building figures
AnalystCourse
frangi-vesselness
Test for Frangi Vesselness filter
totalfinder-osax
Scripting additions used by TotalFinder (SIMBL replacement)
trackmate-overlay-detector
A detector that couples ROIs from an ImageJ 1.x Overlay to Spots for tracking
stelfrich's Repositories
stelfrich/frangi-vesselness
Test for Frangi Vesselness filter
stelfrich/trackmate-overlay-detector
A detector that couples ROIs from an ImageJ 1.x Overlay to Spots for tracking
stelfrich/colour_deconvolution_IJ2
Colour Deconvolution plugin for IJ2
stelfrich/esrf-imagej-plugins
Plugins for ImageJ created at the ESRF
stelfrich/example-script-collection
Example project demonstrating how to package ImageJ scripts into a single jar file
stelfrich/ilastik4ij
ImageJ plugins to run ilastik workflows
stelfrich/imagej-jython-modules-mcve
stelfrich/imagej-legacy-harmonization-mcve
MCVE for testing harmonization in imagej-legacy
stelfrich/imagej-ops
ImageJ Ops: A framework for reusable algorithms
stelfrich/imglib2-algorithm
Image processing algorithms for ImgLib2
stelfrich/IntroToJulia
A Deep Introduction to Julia for Data Science and Scientific Computing
stelfrich/knip-cellprofiler
KNIME Image Processing - CellProfiler Integration
stelfrich/knip-externals
Wraps SciJava projects into OSGi Bundles for use with KNIME Image Processing
stelfrich/knip-imagej2
KNIME ImageJ/ImageJ2 Integration (based on KNIME Image Processing)
stelfrich/legacy-update-bug-mcve
stelfrich/markdown-test
stelfrich/MorphoLibJ
Collection of mathematical morphology methods and plugins for ImageJ
stelfrich/neubias-tm-gitignore
Default .gitignore for NEUBIAS training material
stelfrich/planets
stelfrich/presentation-frameworks-evaluation
Test repository to check out different Markdown-based presentation frameworks.
stelfrich/ro-lite
Research Object Lite
stelfrich/scifio
SCientific Image Format Input & Output: a flexible, extensible framework for image I/O. *EXPERIMENTAL* All API is subject to change, so depend at your own risk! See also @openmicroscopy/bioformats.
stelfrich/scijava-ci-deploy-test
Test "parallel deployment" from Travis and AppVeyor
stelfrich/scijava-ci-deployment
stelfrich/stardist-imagej
stelfrich/stelfrich.github.io
Personal website at https://stelfrich.github.io
stelfrich/teachopencadd
TeachOpenCADD: a teaching platform for computer-aided drug design (CADD) using open source packages and data
stelfrich/TrackMate
TrackMate is your buddy for your everyday tracking.
stelfrich/TrackMate-extras
Some extra modules for TrackMate
stelfrich/training-repos
A super-module of all the repositories used for training sessions