/epiphy

Epistatic selection models in phylogenetics

Primary LanguagePython

epiphy

Epistatic selection models in phylogenetics.

Installation

Recommended prerequisites are miniconda with mamba installed in the base environment. Choose an appropriate architecture $ARCH (both Intel and Apple processors are supported, as well as Linux, see environment-*.yml files) and run:

mamba env create -f environment-$ARCH.yml

Usage

More to come, but for now activate the above environment and:

snakemake -j 1